RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PON2Q15165 354 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 CC2D1AQ6P1N0 951 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 TXNDC11Q6PKC3 985 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 SYNPOQ8N3V7 929 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 OR6B3Q8NGW1 331 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 SYAP1Q96A49 352 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 HPSEQ9Y251 543 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 CCL26Q9Y258 94 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 OBSL1O75147 1896 aa18.79■□□□□ 0.6
PDLIM2-208ENST00000416159 OTOGLQ3ZCN5 2332 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 TRIM66O15016 1216 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 USP17L7P0C7H9 530 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 TDGF1P13385 188 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 ANXA13P27216 316 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 MYL6P60660 151 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 AMPD2Q01433 879 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 CYP27A1Q02318 531 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 FAM160A1Q05DH4 1040 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 RUNX3Q13761 415 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 SLC9A9Q8IVB4 645 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 KIAA0895Q8NCT3 520 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 TMEM174Q8WUU8 243 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 PCED1BQ96HM7 432 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 TRPC7Q9HCX4 862 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 RBM12Q9NTZ6 932 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 DMAC2Q9NW81 257 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 EHD2Q9NZN4 543 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 MYO15AQ9UKN7 3530 aa18.78■□□□□ 0.6
PDLIM2-208ENST00000416159 GREB1Q4ZG55 1949 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 TRAV19A0A0A6YYK7 116 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 PDXKO00764 312 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 SYKP43405 635 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 BIRC3Q13489 604 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 GAS6Q14393 721 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 PDGFRLQ15198 375 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 MDH1BQ5I0G3 518 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 DENND5BQ6ZUT9 1274 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 PLEKHO2Q8TD55 490 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 PARD3BQ8TEW8 1205 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 CCDC47Q96A33 483 aaKnown RBP18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 EPC1Q9H2F5 836 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 VRTNQ9H8Y1 702 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 HPS4Q9NQG7 708 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 ATP6V1DQ9Y5K8 247 aa18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 KIF26AQ9ULI4 1882 aaPredicted RBP18.77■□□□□ 0.6
PDLIM2-208ENST00000416159 ANAPC1Q9H1A4 1944 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 VPS13AQ96RL7 3174 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 KIF20AO95235 890 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 PAPSS2O95340 614 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 CKMP06732 381 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 PFKLP17858 780 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 PTPN1P18031 435 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 CASP4P49662 377 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 PDE6CP51160 858 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 CLDN10P78369 228 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 SATB1Q01826 763 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 CCINQ13939 588 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 WDR44Q5JSH3 913 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 DCLK2Q8N568 766 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 C8orf48Q96LL4 319 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 CYP2S1Q96SQ9 504 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 XYLT2Q9H1B5 865 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 KCTD10Q9H3F6 313 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 EBF3Q9H4W6 596 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 NCDNQ9UBB6 729 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 NXF1Q9UBU9 619 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 NME7Q9Y5B8 376 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 PTPRDP23468 1912 aa18.76■□□□□ 0.59
PDLIM2-208ENST00000416159 FAM237AA0A1B0GTK4 181 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 LRRIQ3A6PVS8 624 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 A8MXQ7 604 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 C4BPAP04003 597 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 HDCP19113 662 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 ID4P47928 161 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 PPP3CCP48454 512 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 GRSF1Q12849 480 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 KCNB1Q14721 858 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 MTF1Q14872 753 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 ZNF667Q5HYK9 610 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 TDRD10Q5VZ19 366 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 TRIM68Q6AZZ1 485 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 KIAA2013Q8IYS2 634 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 ARL14EPQ8N8R7 260 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 EXOC4Q96A65 974 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 TRPM5Q9NZQ8 1165 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 SMG5Q9UPR3 1016 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 GPR179Q6PRD1 2367 aa18.75■□□□□ 0.59
PDLIM2-208ENST00000416159 CFAP54Q96N23 3096 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 F8VP50 259 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 TRDMT1O14717 391 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 CALUO43852 315 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 NR3C1P04150 777 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 RPN1P04843 607 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms