RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 WDFY3Q8IZQ1 3526 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 CHD9Q3L8U1 2897 aa3.14□□□□□ -1.91
LINC00428-201ENST00000415620 RAB3GAP2Q9H2M9 1393 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 TRIOO75962 3097 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 H3BNC9 293 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 KDM1AO60341 852 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 KPNA6O60684 536 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 PRSS23O95084 383 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 GPANK1O95872 356 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 FOLR3P41439 243 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 ID4P47928 161 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 LSSP48449 732 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 GMPSP49915 693 aaPredicted RBP3.13□□□□□ -1.91
LINC00428-201ENST00000415620 FOXG1P55316 489 aaPredicted RBP3.13□□□□□ -1.91
LINC00428-201ENST00000415620 HSD11B2P80365 405 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 ST3GAL2Q16842 350 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 RRP12Q5JTH9 1297 aaKnown RBP3.13□□□□□ -1.91
LINC00428-201ENST00000415620 FOXR2Q6PJQ5 311 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 Q6ZVL8 140 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 KRT26Q7Z3Y9 468 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 VGLL2Q8N8G2 317 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 Q8NA96 180 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 OR7D4Q8NG98 312 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 SSH3Q8TE77 659 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 JDP2Q8WYK2 163 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 RPL36ALQ969Q0 106 aaKnown RBP3.13□□□□□ -1.91
LINC00428-201ENST00000415620 ZNF48Q96MX3 618 aaPredicted RBP3.13□□□□□ -1.91
LINC00428-201ENST00000415620 BCO1Q9HAY6 547 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 USP25Q9UHP3 1055 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 ZNF580Q9UK33 172 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 MGAMO43451 1857 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 PCDH11XQ9BZA7 1347 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 PCDH11YQ9BZA8 1340 aa3.13□□□□□ -1.91
LINC00428-201ENST00000415620 KIF24Q5T7B8 1368 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SMG1Q96Q15 3661 aaKnown RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 WDR87Q6ZQQ6 2873 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 ACACBO00763 2458 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 GBF1Q92538 1859 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 PLXNA1Q9UIW2 1896 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 UBE2Q2LH0YL09 131 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 PROM1O43490 865 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 KRT38O76015 456 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 LPLP06858 475 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 PRR35P0CG20 571 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SRGNP10124 158 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 CCL5P13501 91 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 CANXP27824 592 aaKnown RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 GUCY1A2P33402 732 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 PTPN7P35236 360 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SREBF1P36956 1147 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SCNN1BP51168 640 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 RAP2BP61225 183 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 OCRLQ01968 901 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SREBF2Q12772 1141 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SLC10A2Q12908 348 aaPredicted RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 UBXN2BQ14CS0 331 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 LLGL1Q15334 1064 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 AFMIDQ63HM1 303 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 FCRLBQ6BAA4 426 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 OTUD7BQ6GQQ9 843 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 COLGALT2Q8IYK4 626 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 PRSS33Q8NF86 280 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 DIS3LQ8TF46 1054 aaKnown RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 U2AF1L4Q8WU68 220 aaKnown RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 HOXB13Q92826 284 aaPredicted RBP3.12□□□□□ -1.91
LINC00428-201ENST00000415620 CDCA5Q96FF9 252 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 MRI1Q9BV20 369 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 ARHGAP39Q9C0H5 1083 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 SCOCQ9UIL1 159 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 TBC1D30Q9Y2I9 924 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 WNT6Q9Y6F9 365 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 BPTFQ12830 3046 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 FAM208BQ5VWN6 2430 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 TTC21BQ7Z4L5 1316 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 NPC1L1Q9UHC9 1359 aa3.12□□□□□ -1.91
LINC00428-201ENST00000415620 RIC1Q4ADV7 1423 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 COL1A1P02452 1464 aaPredicted RBP3.11□□□□□ -1.91
LINC00428-201ENST00000415620 OTOFQ9HC10 1997 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 PI4K2BG5E9Z4 385 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 MPPED1O15442 326 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 MOSPD3O75425 235 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 NTN1O95631 604 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 ASMTLO95671 621 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 POMCP01189 267 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 GJB1P08034 283 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 ELFN1P0C7U0 828 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 KELP23276 732 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 SLC6A2P23975 617 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 ADCYAP1R1P41586 468 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 CRKLP46109 303 aaKnown RBP3.11□□□□□ -1.91
LINC00428-201ENST00000415620 MAPK10P53779 464 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 LGALS4P56470 323 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 SP3Q02447 781 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 PCBP1Q15365 356 aaKnown RBP eCLIP3.11□□□□□ -1.91
LINC00428-201ENST00000415620 SEPT7Q16181 437 aaKnown RBP3.11□□□□□ -1.91
LINC00428-201ENST00000415620 GEN1Q17RS7 908 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 TSTD2Q5T7W7 516 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 ZNF626Q68DY1 528 aa3.11□□□□□ -1.91
LINC00428-201ENST00000415620 SLC9A4Q6AI14 798 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms