RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 PTPN1P18031 435 aaKnown RBP17.94■□□□□ 0.46
COL6A2-205ENST00000413758 CCR3P51677 355 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 NDUFA8P51970 172 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 AP3M2P53677 418 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 ZNF699Q32M78 642 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 DGKKQ5KSL6 1271 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 TXNDC11Q6PKC3 985 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 PCED1BQ96HM7 432 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 MYRFLQ96LU7 910 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 EBF3Q9H4W6 596 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 PRMT8Q9NR22 394 aaPredicted RBP17.94■□□□□ 0.46
COL6A2-205ENST00000413758 HPSEQ9Y251 543 aa17.94■□□□□ 0.46
COL6A2-205ENST00000413758 PTPRZ1P23471 2315 aaPredicted RBP17.94■□□□□ 0.46
COL6A2-205ENST00000413758 F5P12259 2224 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 LRRIQ3A6PVS8 624 aaPredicted RBP17.93■□□□□ 0.46
COL6A2-205ENST00000413758 SOBPA7XYQ1 873 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 PDXKO00764 312 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 TRIM66O15016 1216 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 CALUO43852 315 aaPredicted RBP17.93■□□□□ 0.46
COL6A2-205ENST00000413758 CXCL12P48061 93 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 NRLP54845 237 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 RUNX3Q13761 415 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 NCOA4Q13772 614 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 KCNB1Q14721 858 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 ZNF667Q5HYK9 610 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 TDRD10Q5VZ19 366 aaKnown RBP17.93■□□□□ 0.46
COL6A2-205ENST00000413758 TRIM68Q6AZZ1 485 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 SCARA5Q6ZMJ2 495 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 DENND5BQ6ZUT9 1274 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 PLEKHO2Q8TD55 490 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 PARD3BQ8TEW8 1205 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 SPATA17Q96L03 361 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 CYP2S1Q96SQ9 504 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 MED10Q9BTT4 135 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 DPEP3Q9H4B8 488 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 EHD2Q9NZN4 543 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 NCDNQ9UBB6 729 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
COL6A2-205ENST00000413758 DENND4CQ5VZ89 1909 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 TADA3O75528 432 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 ABL1P00519 1130 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 FAM163BP0C2L3 166 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 PRR29P0C7W0 189 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 SATB1Q01826 763 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 IFRD2Q12894 506 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-205ENST00000413758 ZNF268Q14587 947 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-205ENST00000413758 KIAA2013Q8IYS2 634 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 SPEM1Q8N4L4 309 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 ARL14EPQ8N8R7 260 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-205ENST00000413758 RUBCNQ92622 972 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 FAM126AQ9BYI3 521 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-205ENST00000413758 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
COL6A2-205ENST00000413758 KCTD10Q9H3F6 313 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 SMYD3Q9H7B4 428 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 DMAC2Q9NW81 257 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 TRPM5Q9NZQ8 1165 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 ATP8B3O60423 1300 aa17.92■□□□□ 0.46
COL6A2-205ENST00000413758 OBSL1O75147 1896 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 KIF26AQ9ULI4 1882 aaPredicted RBP17.91■□□□□ 0.46
COL6A2-205ENST00000413758 C2orf78A6NCI8 922 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 F8VP50 259 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
COL6A2-205ENST00000413758 P4HA1P13674 534 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 ARSAP15289 507 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 HDCP19113 662 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 RAP1GAPP47736 663 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 IFNAR2P48551 515 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 CDH8P55286 799 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 AMPD2Q01433 879 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 BECN1Q14457 450 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 MTF1Q14872 753 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 PDGFRLQ15198 375 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 KRBA2Q6ZNG9 492 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 Q6ZS52 159 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 SLC9A9Q8IVB4 645 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 B3GALNT2Q8NCR0 500 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 SECISBP2LQ93073 1101 aaKnown RBP17.91■□□□□ 0.46
COL6A2-205ENST00000413758 ELMO3Q96BJ8 720 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 CCDC34Q96HJ3 373 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 SLC22A12Q96S37 553 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 FAM83CQ9BQN1 747 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 ELOVL4Q9GZR5 314 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 XYLT2Q9H1B5 865 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 HPS4Q9NQG7 708 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 DUS2Q9NX74 493 aaKnown RBP17.91■□□□□ 0.46
COL6A2-205ENST00000413758 MAPK8IP1Q9UQF2 711 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 USP34Q70CQ2 3546 aa17.91■□□□□ 0.46
COL6A2-205ENST00000413758 FANCMQ8IYD8 2048 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 CLDN5O00501 218 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 C4BPAP04003 597 aaKnown RBP17.9■□□□□ 0.46
COL6A2-205ENST00000413758 PDE6CP51160 858 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 USP46P62068 366 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 DLG4P78352 724 aa17.9■□□□□ 0.46
COL6A2-205ENST00000413758 GRSF1Q12849 480 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms