RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 ACTN4O43707 911 aaKnown RBP23.85■■□□□ 1.41
MSH6-202ENST00000411819 PHACTR2O75167 634 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 CKMP06732 381 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 ANXA13P27216 316 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 GRIK1P39086 918 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 WDR72Q3MJ13 1102 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 MDH1BQ5I0G3 518 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 WDR44Q5JSH3 913 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 VSTM1Q6UX27 236 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 MAMSTRQ6ZN01 415 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 C12orf56Q8IXR9 622 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 FSIP1Q8NA03 581 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 GOLGA5Q8TBA6 731 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 SPATA32Q96LK8 384 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 MYRFLQ96LU7 910 aa23.85■■□□□ 1.41
MSH6-202ENST00000411819 TRAV19A0A0A6YYK7 116 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 A0A1B0GVL5 298 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 TDGF1P13385 188 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 PFKFB1P16118 471 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 CASP4P49662 377 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 BIRC3Q13489 604 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 RUNX3Q13761 415 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 RIN3Q8TB24 985 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 SECISBP2LQ93073 1101 aaKnown RBP23.84■■□□□ 1.41
MSH6-202ENST00000411819 PAGE5Q96GU1 130 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 PCED1BQ96HM7 432 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 FAM83CQ9BQN1 747 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 HPS4Q9NQG7 708 aa23.84■■□□□ 1.41
MSH6-202ENST00000411819 NXF1Q9UBU9 619 aaKnown RBP23.84■■□□□ 1.41
MSH6-202ENST00000411819 HELZP42694 1942 aaKnown RBP23.83■■□□□ 1.41
MSH6-202ENST00000411819 KLRC4O43908 158 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 USP17L7P0C7H9 530 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 GNL1P36915 607 aaPredicted RBP23.83■■□□□ 1.41
MSH6-202ENST00000411819 MYL6P60660 151 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 KRT85P78386 507 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 FAM160A1Q05DH4 1040 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 ZNF268Q14587 947 aaPredicted RBP23.83■■□□□ 1.41
MSH6-202ENST00000411819 KCNB1Q14721 858 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 KMT5BQ4FZB7 885 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 KIAA0895Q8NCT3 520 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 MYCBPAPQ8TBZ2 947 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 ZNF516Q92618 1163 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 CHAMP1Q96JM3 812 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 CYP2S1Q96SQ9 504 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 GZF1Q9H116 711 aaPredicted RBP23.83■■□□□ 1.41
MSH6-202ENST00000411819 ZNF292O60281 2723 aa23.83■■□□□ 1.41
MSH6-202ENST00000411819 TRIM66O15016 1216 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 TACC1O75410 805 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 ARSAP15289 507 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 STK4Q13043 487 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 CCINQ13939 588 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 MTF1Q14872 753 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 ARL14EPQ8N8R7 260 aaPredicted RBP23.82■■□□□ 1.4
MSH6-202ENST00000411819 SYAP1Q96A49 352 aaPredicted RBP23.82■■□□□ 1.4
MSH6-202ENST00000411819 SPATA17Q96L03 361 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 SLC22A12Q96S37 553 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 RAB23Q9ULC3 237 aa23.82■■□□□ 1.4
MSH6-202ENST00000411819 C2orf78A6NCI8 922 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 A8MXQ7 604 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 PDGFRLQ15198 375 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 LPAL2Q16609 132 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 DENND5BQ6ZUT9 1274 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 PLEKHO2Q8TD55 490 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 DPEP3Q9H4B8 488 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 GMEB2Q9UKD1 530 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 NME7Q9Y5B8 376 aa23.81■■□□□ 1.4
MSH6-202ENST00000411819 OTOL1A6NHN0 477 aaPredicted RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 LRRIQ3A6PVS8 624 aaPredicted RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 CHURC1-FNTBB4DL54 471 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 F8VP50 259 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 STAU1O95793 577 aaKnown RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 PTPN1P18031 435 aaKnown RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 CMA1P23946 247 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 ATICP31939 592 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 IFNAR2P48551 515 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 FNTBP49356 437 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 GRSF1Q12849 480 aaKnown RBP eCLIP23.8■■□□□ 1.4
MSH6-202ENST00000411819 USP4Q13107 963 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 PSMD2Q13200 908 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 ZNF77Q15935 545 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 ZNF699Q32M78 642 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 TDRD10Q5VZ19 366 aaKnown RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 HEATR6Q6AI08 1181 aaKnown RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 PRR23BQ6ZRT6 265 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 SYNPOQ8N3V7 929 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 CPA6Q8N4T0 437 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 DUS2Q9NX74 493 aaKnown RBP23.8■■□□□ 1.4
MSH6-202ENST00000411819 TRPM5Q9NZQ8 1165 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 USP25Q9UHP3 1055 aa23.8■■□□□ 1.4
MSH6-202ENST00000411819 USP46P62068 366 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 AMPD2Q01433 879 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 DMWDQ09019 674 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 IFRD2Q12894 506 aaPredicted RBP23.79■■□□□ 1.4
MSH6-202ENST00000411819 SCARA5Q6ZMJ2 495 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 SH3RF2Q8TEC5 729 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 RMDN1Q96DB5 314 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 CEP295NLQ96MC4 621 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 ELOVL4Q9GZR5 314 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 XYLT2Q9H1B5 865 aa23.79■■□□□ 1.4
MSH6-202ENST00000411819 SMYD3Q9H7B4 428 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms