RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GAP43P17677 238 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GBP1P32455 592 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 LHX1P48742 406 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 DGKEP52429 567 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 RBP5P82980 135 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SHC2P98077 582 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 USP4Q13107 963 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SV2BQ7L1I2 683 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 DNAJC19Q96DA6 116 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 EDEM2Q9BV94 578 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GCNT4Q9P109 453 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 STK17AQ9UEE5 414 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
HLA-DQB2-229ENST00000411527 THADAQ6YHU6 1953 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 C4orf47A7E2U8 309 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GABRDO14764 452 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GCNT3O95395 438 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 HDCP19113 662 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GARTP22102 1010 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PCSK1P29120 753 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 KCNB1Q14721 858 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SOWAHAQ2M3V2 549 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PSAPL1Q6NUJ1 521 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ADGRF2Q8IZF7 708 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ABCA7Q8IZY2 2146 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 TSTD1Q8NFU3 115 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SPATA18Q8TC71 538 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PCIF1Q9H4Z3 704 aa15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.27■□□□□ 0.04
HLA-DQB2-229ENST00000411527 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ATP2C2O75185 946 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CASP5P51878 434 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 USP39Q53GS9 565 aaKnown RBP15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 C2orf27AQ580R0 203 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FAM171BQ6P995 826 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CCDC26Q8TAB7 109 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 USP33Q8TEY7 942 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CBWD1Q9BRT8 395 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TPSD1Q9BZJ3 242 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MTMR12Q9C0I1 747 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MAGEC2Q9UBF1 373 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SIX4Q9UIU6 781 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CLIC4Q9Y696 253 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 USP24Q9UPU5 2620 aa15.26■□□□□ 0.03
HLA-DQB2-229ENST00000411527 NFATC1O95644 943 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 IDEP14735 1019 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LMO2P25791 158 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MAGEA11P43364 429 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 NOVA1P51513 510 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SEC13P55735 322 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PSMC1P62191 440 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MYO1EQ12965 1108 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 DAB2IPQ5VWQ8 1189 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LMBRD2Q68DH5 695 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 DPH6Q7L8W6 267 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ANKRD36BP1Q96IX9 119 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CLIC6Q96NY7 704 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ARHGAP26Q9UNA1 814 aa15.25■□□□□ 0.03
HLA-DQB2-229ENST00000411527 LNP1A1A4G5 178 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ANTXRLA6NF34 631 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 K7EQS6 105 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 GIPC1O14908 333 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PRPF6O94906 941 aaKnown RBP15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TCF3P15923 654 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 BDNFP23560 247 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 GRIK1P39086 918 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 TXLNAP40222 546 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 OPRD1P41143 372 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PDE6CP51160 858 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ZXDBP98169 803 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ALCAMQ13740 583 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PMS2CLQ68D20 193 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 ANO7Q6IWH7 933 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 C11orf74Q86VG3 221 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 CCDC33Q8N5R6 958 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 MYLPFQ96A32 169 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 HPDLQ96IR7 371 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 SPATA17Q96L03 361 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 FGFBP2Q9BYJ0 223 aa15.24■□□□□ 0.03
HLA-DQB2-229ENST00000411527 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms