RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 COPS5Q92905 334 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 IL17RAQ96F46 866 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 SENP5Q96HI0 755 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 SETDB2Q96T68 719 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 VGLL1Q99990 258 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 RBM4BQ9BQ04 359 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 JPH2Q9BR39 696 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 IL25Q9H293 177 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 PRDM12Q9H4Q4 367 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 MAGEE1Q9HCI5 957 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 PDE11AQ9HCR9 933 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 GPRC5CQ9NQ84 441 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 CYTL1Q9NRR1 136 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 TFIP11Q9UBB9 837 aaKnown RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 CDC14AQ9UNH5 594 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF256Q9Y2P7 627 aaPredicted RBP-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 UBIAD1Q9Y5Z9 338 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 CUBNO60494 3623 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 DNAH2Q9P225 4427 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 NBPF19A0A087WUL8 3843 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 PCNX3Q9H6A9 2034 aa-1.11□□□□□ -2.59
RNU4-88P-201ENST00000411220 ITPR2Q14571 2701 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 CACNA1DQ01668 2161 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 NDUFAF8A1L188 74 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 WDR27A2RRH5 827 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 NRP2O60462 931 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 LRP3O75074 770 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 ANGP03950 147 aaKnown RBP-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 CDC42EP1Q00587 391 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 PPIGQ13427 754 aaKnown RBP eCLIP-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 GEN1Q17RS7 908 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 Q5PR19 223 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM83HQ6ZRV2 1179 aaPredicted RBP-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 TSHZ1Q6ZSZ6 1077 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 FBXO33Q7Z6M2 555 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 KIAA0319LQ8IZA0 1049 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 OR5M3Q8NGP4 307 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 UHMK1Q8TAS1 419 aaKnown RBP-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 FBXO30Q8TB52 745 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 LRRC8CQ8TDW0 803 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 SSC4DQ8WTU2 575 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 KLHL29Q96CT2 875 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 IGSF21Q96ID5 467 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 KLHL32Q96NJ5 620 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZIM3Q96PE6 472 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 LITAFQ99732 161 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 TUBA1CQ9BQE3 449 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 AMNQ9BXJ7 453 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 RNPEPQ9H4A4 650 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 COG5Q9UP83 839 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 THRAP3Q9Y2W1 955 aaKnown RBP-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 MTORP42345 2549 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 ITPR1Q14643 2758 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 TNRQ92752 1358 aa-1.12□□□□□ -2.59
RNU4-88P-201ENST00000411220 CLEC18AA5D8T8 446 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM86C2PA6NEL3 165 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 C10orf142B7Z368 130 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 HCRTO43612 131 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 GPANK1O95872 356 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 SLC5A2P31639 672 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 MC4RP32245 332 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CPOXP36551 454 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CRKP46108 304 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 LHX1P48742 406 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 POLD2P49005 469 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CLK1P49759 484 aaKnown RBP-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CHN2P52757 468 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 ODF1Q14990 250 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 RBBP5Q15291 538 aaKnown RBP-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 MAPKAPK3Q16644 382 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 PGS1Q32NB8 556 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 AXDND1Q5T1B0 1012 aaPredicted RBP-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 FOXB2Q5VYV0 432 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAAP20Q6NZ36 180 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 GFRALQ6UXV0 394 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CREB3L2Q70SY1 520 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 KCTD1Q719H9 257 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 CLEC18CQ8NCF0 446 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 RNF169Q8NCN4 708 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 C17orf47Q8NEP4 570 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 TFAP2CQ92754 450 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 PAWRQ96IZ0 340 aaKnown RBP-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 PRR25Q96S07 402 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 SELENOOQ9BVL4 669 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZNF304Q9HCX3 659 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 PLK2Q9NYY3 685 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 G3BP2Q9UN86 482 aaKnown RBP-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 DAAM1Q9Y4D1 1078 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 ABCA12Q86UK0 2595 aa-1.13□□□□□ -2.59
RNU4-88P-201ENST00000411220 ZFC3H1O60293 1989 aaKnown RBP-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 DNAH3Q8TD57 4116 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 CCDC88CQ9P219 2028 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 A0A1W2PPR1 153 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 COLCA2A8K830 154 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 PRR32B1ATL7 298 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 DAPK3O43293 454 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 CBR3O75828 277 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 TNFRSF6BO95407 300 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 MPIG6BO95866 241 aa-1.14□□□□□ -2.59
RNU4-88P-201ENST00000411220 FAM163BP0C2L3 166 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms