RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SLC24A5Q71RS6 500 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 RHOT1Q8IXI2 618 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 SLC35F5Q8WV83 523 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 HERPUD2Q9BSE4 406 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 VIPAS39Q9H9C1 493 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 DDX43Q9NXZ2 648 aaKnown RBP18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 STIM2Q9P246 746 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 CCDC188H7C350 402 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 GABRDO14764 452 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 SART1O43290 800 aaKnown RBP18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 PSTPIP1O43586 416 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 GRAP2O75791 330 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 B3GAT3O94766 335 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 ITGB1P05556 798 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 TUSC3Q13454 348 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 BFSP2Q13515 415 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 TXNRD3NBQ6F5E7 133 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 TRNP1Q6NT89 227 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 SLC13A5Q86YT5 568 aaPredicted RBP18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 ACSF2Q96CM8 615 aaPredicted RBP18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 SLC4A5Q9BY07 1137 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 UBN1Q9NPG3 1134 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 AMACRQ9UHK6 382 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 PRDM4Q9UKN5 801 aa18.51■□□□□ 0.55
LRPPRC-203ENST00000409946 ESYT3A0FGR9 886 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 MNX1P50219 401 aaPredicted RBP18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 BST2Q10589 180 aaKnown RBP18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 CASP8Q14790 479 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 ANKS1BQ7Z6G8 1248 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 ANKRD52Q8NB46 1076 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 DBF4BQ8NFT6 615 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 TNIP3Q96KP6 325 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 NAP1L3Q99457 506 aaPredicted RBP18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 B3GNT5Q9BYG0 378 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
LRPPRC-203ENST00000409946 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 PTPN1P18031 435 aaKnown RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 AARSP49588 968 aaKnown RBP eCLIP18.49■□□□□ 0.557e-6■□□□□ 11.2
LRPPRC-203ENST00000409946 BCAT1P54687 386 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 TAF5Q15542 800 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 GLE1Q53GS7 698 aaKnown RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 ZNF280BQ86YH2 543 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 CCDC50Q8IVM0 306 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 FUKQ8N0W3 1084 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 ARFGAP1Q8N6T3 406 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 NIPA2Q8N8Q9 360 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 PRELID2Q8N945 189 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 CLEC4CQ8WTT0 213 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 SCLYQ96I15 445 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 MIS12Q9H081 205 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 CRTAC1Q9NQ79 661 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 PI4K2BG5E9Z4 385 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 DDHD2O94830 711 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 FAM189BP81408 668 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 GUCY2DQ02846 1103 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 SIX1Q15475 284 aaPredicted RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 TRADDQ15628 312 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 CCNI2Q6ZMN8 369 aaPredicted RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 PAQR9Q6ZVX9 377 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 ZNF771Q7L3S4 317 aaPredicted RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 SCUBE3Q8IX30 993 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 RNF25Q96BH1 459 aaPredicted RBP18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 EPB41L5Q9HCM4 733 aa18.49■□□□□ 0.55
LRPPRC-203ENST00000409946 GOLGA6L10A0A0M3HER8 536 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 INPPL1O15357 1258 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 TTI1O43156 1089 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 PAPSS1O43252 624 aaPredicted RBP18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 EOMESO95936 686 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 RARAP10276 462 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 HSPA6P17066 643 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 FLT3P36888 993 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 RABGGTBP53611 331 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 RAB6CQ53S08 254 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 PLEKHG4Q58EX7 1191 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 OLFML1Q6UWY5 402 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 TMEM110Q86TL2 294 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 KATNAL2Q8IYT4 538 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 DIS3LQ8TF46 1054 aaKnown RBP18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 RTP3Q9BQQ7 232 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 SYT15Q9BQS2 421 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 RAB6CQ9H0N0 254 aa18.48■□□□□ 0.55
LRPPRC-203ENST00000409946 MICAL3Q7RTP6 2002 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 PTPRDP23468 1912 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 LRCH4O75427 683 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 BEST1O76090 585 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 KRT1P04264 644 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 LCP1P13796 627 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 GATMP50440 423 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 CCL23P55773 120 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 NOMO2Q5JPE7 1267 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 ZFYVE27Q5T4F4 411 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 SH3PXD2AQ5TCZ1 1133 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 TMEM86AQ8N2M4 240 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 FNIP1Q8TF40 1166 aa18.47■□□□□ 0.55
LRPPRC-203ENST00000409946 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms