RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SPEGQ15772 3267 aa13.66□□□□□ -0.22
CHRNA1-205ENST00000409542 SCN1AP35498 2009 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 LAD1O00515 517 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 GIPC1O14908 333 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 DCLK1O15075 740 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 ADRB2P07550 413 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 ARSAP15289 507 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 NMT1P30419 496 aaKnown RBP13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 TXLNAP40222 546 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 MPLP40238 635 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 PLK5Q496M5 336 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 ARHGAP15Q53QZ3 475 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 KRT79Q5XKE5 535 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 JADE1Q6IE81 842 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
CHRNA1-205ENST00000409542 A0A1B0GTH6 734 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 C1QTNF9BB2RNN3 333 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 TRDMT1O14717 391 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 RNF40O75150 1001 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 C1QTNF9P0C862 333 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 PRPHP41219 470 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 AFMP43652 599 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 RUNX3Q13761 415 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 MGAT5BQ3V5L5 792 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ARSHQ5FYA8 562 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 CDKAL1Q5VV42 579 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 PSAPL1Q6NUJ1 521 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ITIH5Q86UX2 942 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 CMTM8Q8IZV2 173 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 SYT2Q8N9I0 419 aaPredicted RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ANKRD7Q92527 254 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 EZH1Q92800 747 aaPredicted RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 USP13Q92995 863 aaPredicted RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ZC3H10Q96K80 434 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 HHIPQ96QV1 700 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ZCWPW1Q9H0M4 648 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 DUSP15Q9H1R2 295 aaPredicted RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 TRMT1Q9NXH9 659 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 SLC8A2Q9UPR5 921 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 ASPMQ8IZT6 3477 aa13.64□□□□□ -0.23
CHRNA1-205ENST00000409542 CCDC163A0A0D9SF12 145 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 ANTXRLA6NF34 631 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 PIRO00625 290 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 FGF19O95750 216 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 TOP3BO95985 862 aaKnown RBP13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 F11P03951 625 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 CYP11A1P05108 521 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 NFICP08651 508 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 CDK11BP21127 795 aaKnown RBP13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 GPR15P49685 360 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 GALK1P51570 392 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 SLC12A3P55017 1021 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 BICD1Q96G01 975 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 HSFX1Q9UBD0 423 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
CHRNA1-205ENST00000409542 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 ARHGAP6O43182 974 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 MYL1P05976 194 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 PROS1P07225 676 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 HAPLN1P10915 354 aaPredicted RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 ODC1P11926 461 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 HOXB3P14651 431 aaPredicted RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 SPINK2P20155 84 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 TUFMP49411 452 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 SMTNP53814 917 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 NR1I3Q14994 352 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 HYIQ5T013 277 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 TXNDC8Q6A555 127 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 SLC39A4Q6P5W5 647 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 DTHD1Q6ZMT9 781 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 TMEM139Q8IV31 216 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 RAB34Q9BZG1 259 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 VPS45Q9NRW7 570 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 TMLHEQ9NVH6 421 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 THG1LQ9NWX6 298 aaKnown RBP13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 INVSQ9Y283 1065 aa13.62□□□□□ -0.23
CHRNA1-205ENST00000409542 PCDHGA5Q9Y5G8 931 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms