RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 FETUBQ9UGM5 382 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 UBIAD1Q9Y5Z9 338 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 COMMD3-BMI1R4GMX3 469 aa16.19■□□□□ 0.18
LIMS2-205ENST00000409455 UNGP13051 313 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ANPEPP15144 967 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 NSFP46459 744 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ARHGEF16Q5VV41 709 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 RFX8Q6ZV50 586 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ST13P4Q8IZP2 240 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ZSWIM2Q8NEG5 633 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 CPA5Q8WXQ8 436 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 DHX38Q92620 1227 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 OXNAD1Q96HP4 312 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 FNBP1Q96RU3 617 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 PDCD2LQ9BRP1 358 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 GPC3P51654 580 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 NOP14P78316 857 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 CCDC142Q17RM4 750 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 TRMT5Q32P41 509 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 B3GNT9Q6UX72 402 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 NET1Q7Z628 596 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 TMPRSS6Q8IU80 811 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 KCNK13Q9HB14 408 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
LIMS2-205ENST00000409455 SLC17A7Q9P2U7 560 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 PARP14Q460N5 1801 aa16.18■□□□□ 0.18
LIMS2-205ENST00000409455 H3BRJ5 948 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 GOLGA8RI6L899 631 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 FCHO1O14526 889 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 DLDP09622 509 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 RTP1P59025 263 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 TAS2R40P59535 323 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 MTMR1Q13613 665 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 HIF1AQ16665 826 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 KLHL38Q2WGJ6 581 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ZFYVE27Q5T4F4 411 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 PADI6Q6TGC4 694 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ANKMY2Q8IV38 441 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ALLCQ8N6M5 410 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 BANPQ8N9N5 519 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 PAFAH2Q99487 392 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 RIT2Q99578 217 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ATXN10Q9UBB4 475 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 MYPNQ86TC9 1320 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 CYP1A1P04798 512 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ADRB2P07550 413 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 MAPTP10636 758 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 CRABP2P29373 138 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 RNASEH2BQ5TBB1 312 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 KAZNQ674X7 775 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ADGRD1Q6QNK2 874 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 NIPA1Q7RTP0 329 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 TTC7BQ86TV6 843 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ATP11CQ8NB49 1132 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 PPP2R3CQ969Q6 453 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 HAPLN3Q96S86 360 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 TMEM8AQ9HCN3 771 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 CHCHD3Q9NX63 227 aaKnown RBP16.17■□□□□ 0.18
LIMS2-205ENST00000409455 ARMCX1Q9P291 453 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 DNAJB4Q9UDY4 337 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 RABGEF1Q9UJ41 708 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 NFASCO94856 1347 aa16.17■□□□□ 0.18
LIMS2-205ENST00000409455 B2RBV5 119 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 DHX15O43143 795 aaKnown RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 MYL2P10916 166 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 ATF7P17544 494 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 TFDP1Q14186 410 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 EFTUD2Q15029 972 aaKnown RBP eCLIP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 SNRNP35Q16560 246 aaKnown RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 C2CD6Q53TS8 623 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 CFAP157Q5JU67 520 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 LIN9Q5TKA1 542 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 FAM91A1Q658Y4 838 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 LLGL2Q6P1M3 1020 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 DRICH1Q6PGQ1 229 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 MARK2Q7KZI7 788 aaKnown RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 SCUBE1Q8IWY4 988 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 PYROXD1Q8WU10 500 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 MIS12Q9H081 205 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 C12orf65Q9H3J6 166 aaKnown RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 AGO4Q9HCK5 861 aaKnown RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 RAB20Q9NX57 234 aa16.16■□□□□ 0.18
LIMS2-205ENST00000409455 A0A0G2JLL6 359 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-205ENST00000409455 LPXNO60711 386 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms