RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 AIPL1Q9NZN9 384 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 ARHGAP20Q9P2F6 1191 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 TECTAO75443 2155 aa8.88□□□□□ -0.99
GPC3-203ENST00000406757 SF3B1O75533 1304 aaKnown RBP eCLIP8.87□□□□□ -0.99
GPC3-203ENST00000406757 MYBPHLA2RUH7 354 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 SOWAHDA6NJG2 315 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 HIDE1A8MVS5 230 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TMCO5BA8MYB1 307 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CLDN5O00501 218 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 GABRDO14764 452 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ADAM12O43184 909 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 THAP12O43422 761 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TRAPPC3O43617 180 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 SERPING1P05155 500 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 MMEP08473 750 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 SRGAP2BP0DMP2 458 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CCDC130P13994 396 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CYP11B1P15538 503 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 FERP16591 822 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CHRNB2P17787 502 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 FGFR3P22607 806 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 RFX1P22670 979 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ADORA2BP29275 332 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 GNA15P30679 374 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ZNF132P52740 706 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PTPN5P54829 565 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 VCPP55072 806 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 GSDMDP57764 484 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 YWHAEP62258 255 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 PLCB3Q01970 1234 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 YWHAHQ04917 246 aaPredicted RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 PTK2Q05397 1052 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 SIGLEC14Q08ET2 396 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 INCA1Q0VD86 236 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TCF15Q12870 199 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 KCNC3Q14003 757 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CTXN3Q4LDR2 81 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TDRD12Q587J7 1177 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PDE12Q6L8Q7 609 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 ANKRD54Q6NXT1 300 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 RAD9BQ6WBX8 426 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TMEM139Q8IV31 216 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PASD1Q8IV76 773 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 VPS52Q8N1B4 723 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 THEM5Q8N1Q8 247 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 FBXL6Q8N531 539 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 UBA3Q8TBC4 463 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 IQCDQ96DY2 449 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 FAM81BQ96LP2 452 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PANX2Q96RD6 677 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 PCDHB18PQ96TA0 734 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 BAG1Q99933 345 aaPredicted RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 AGPAT1Q99943 283 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 SYT15Q9BQS2 421 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 TTPALQ9BTX7 342 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 NT5C1AQ9BXI3 368 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 S1PR5Q9H228 398 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CRTAC1Q9NQ79 661 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ENTPD7Q9NQZ7 604 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 ZNHIT6Q9NWK9 470 aaKnown RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 CDH22Q9UJ99 828 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 GTF3C4Q9UKN8 822 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 CNTN6Q9UQ52 1028 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
GPC3-203ENST00000406757 DMDP11532 3685 aa8.87□□□□□ -0.99
GPC3-203ENST00000406757 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 ZNF318Q5VUA4 2279 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 EFEMP2O95967 443 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 SOD2P04179 222 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 CYP11A1P05108 521 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 TYMPP19971 482 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 LHX1P48742 406 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 CCZ1BP86790 482 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 CCZ1P86791 482 aaPredicted RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 KRT17Q04695 432 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 GFPT1Q06210 699 aaPredicted RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 DSG2Q14126 1118 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 MRPL58Q14197 206 aaKnown RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 GOLGA7BQ2TAP0 167 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 USP41Q3LFD5 358 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 PPP1R26Q5T8A7 1209 aaPredicted RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 KIAA1841Q6NSI8 718 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 DENND1BQ6P3S1 775 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 SYCE2Q6PIF2 218 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 TMEM184AQ6ZMB5 413 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 PHLDB2Q86SQ0 1253 aa8.86□□□□□ -0.99
GPC3-203ENST00000406757 DDX53Q86TM3 631 aaKnown RBP8.86□□□□□ -0.99
GPC3-203ENST00000406757 PALB2Q86YC2 1186 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms