RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ELOA2Q8IYF1 753 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPARTQ8N0X7 666 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 CLASRPQ8N2M8 674 aaKnown RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 MB21D1Q8N884 522 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 STT3BQ8TCJ2 826 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 OTUD7AQ8TE49 926 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 STYXQ8WUJ0 223 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 PYM1Q9BRP8 204 aaKnown RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 TLR10Q9BXR5 811 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 SEPSECSQ9HD40 501 aaKnown RBP5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 RNF181Q9P0P0 153 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 IGSF9Q9P2J2 1179 aa5.5□□□□□ -1.53
HMGB3P18-201ENST00000406327 IPO5O00410 1097 aaKnown RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 RGS10O43665 173 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 TRIM13O60858 407 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 RASAL1O95294 804 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 AGR2O95994 175 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 CFPP27918 469 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 CST5P28325 142 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 ATICP31939 592 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 MSX2P35548 267 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 BUD31P41223 144 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 PRKAG1P54619 331 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 TIGD6Q17RP2 521 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 VMACQ2NL98 169 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZNF750Q32MQ0 723 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 JMJD6Q6NYC1 403 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SIAH1Q8IUQ4 282 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 RASGRP3Q8IV61 690 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 NRSN1Q8IZ57 195 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 POC1BQ8TC44 478 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 BPIFB1Q8TDL5 484 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 THAP4Q8WY91 577 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 FAM227BQ96M60 508 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 DCLRE1CQ96SD1 692 aaKnown RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 RTKNQ9BST9 563 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC46A2Q9BY10 475 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC25A32Q9H2D1 315 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 TP63Q9H3D4 680 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC13A4Q9UKG4 626 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SH3BP1Q9Y3L3 701 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 DTNAQ9Y4J8 743 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 NCAPD3P42695 1498 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 ABCC8Q09428 1581 aa5.49□□□□□ -1.53
HMGB3P18-201ENST00000406327 SOGA1O94964 1423 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 WRNQ14191 1432 aaPredicted RBP eCLIP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 EEA1Q15075 1411 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 FCHO1O14526 889 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TOR1BO14657 336 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 DCLK1O15075 740 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 ACTL6BO94805 426 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TNFRSF6BO95407 300 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 VIPP01282 170 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 KCNA2P16389 499 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 XBP1P17861 261 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 HK1P19367 917 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 MST1P26927 711 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 PRKAR1BP31321 381 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 DGKEP52429 567 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 LILRA4P59901 499 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 AP2B1P63010 937 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 GPS1Q13098 491 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TAF5Q15542 800 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 ARHGAP15Q53QZ3 475 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TMTC4Q5T4D3 741 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 AGAP9Q5VTM2 703 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TSHZ3Q63HK5 1081 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 NAIF1Q69YI7 327 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 SULT6B1Q6IMI4 303 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 CLEC4GQ6UXB4 293 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 RAB11FIP2Q7L804 512 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 CLNKQ7Z7G1 428 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 WDR60Q8WVS4 1066 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 SDCCAG3Q96C92 435 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 GRAMD1AQ96CP6 724 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 MARS2Q96GW9 593 aaKnown RBP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 NELL2Q99435 816 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 PTDSS2Q9BVG9 487 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 DNMT3BQ9UBC3 853 aaKnown RBP5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 DNAJB11Q9UBS4 358 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 NFU1Q9UMS0 254 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 HPSEQ9Y251 543 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 TMEM98Q9Y2Y6 226 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 HS3ST4Q9Y661 456 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZNF536O15090 1300 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 SPATA31A3Q5VYP0 1347 aa5.48□□□□□ -1.53
HMGB3P18-201ENST00000406327 HMX3A6NHT5 357 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 J3KRW8 73 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 ERN1O75460 977 aaKnown RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 NTSR2O95665 410 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 HSP90AA1P07900 732 aaKnown RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 SRGNP10124 158 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 ANXA11P50995 505 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms