RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 TMC2Q8TDI7 906 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 FBXL18Q96ME1 805 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 FNBP1Q96RU3 617 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 ECSITQ9BQ95 431 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 THTPAQ9BU02 230 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 SPATA16Q9BXB7 569 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
ATG4B-205ENST00000404914 MMADHCQ9H3L0 296 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-205ENST00000404914 CNTN3Q9P232 1028 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
ATG4B-205ENST00000404914 CCDC195A0A1B0GUA6 201 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 KITP10721 976 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 RANBP1P43487 201 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 PDCD2Q16342 344 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-205ENST00000404914 SMTNL2Q2TAL5 461 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 XKR9Q5GH70 373 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 TDRD10Q5VZ19 366 aaKnown RBP16.25■□□□□ 0.19
ATG4B-205ENST00000404914 DRICH1Q6PGQ1 229 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-205ENST00000404914 C15orf39Q6ZRI6 1047 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 CEP128Q6ZU80 1094 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 RCOR2Q8IZ40 523 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 ABRAQ8N0Z2 381 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 NAT8LQ8N9F0 302 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 ZDHHC15Q96MV8 337 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 MCEEQ96PE7 176 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 NDNQ99608 321 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 PCDH9Q9HC56 1237 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 PDP2Q9P2J9 529 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 VNN1O95497 513 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 HLA-DRAP01903 254 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 MT-ND3P03897 115 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 RPL22P35268 128 aaKnown RBP16.25■□□□□ 0.19
ATG4B-205ENST00000404914 CDKN2BP42772 138 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 TGFB2P61812 414 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 ULK2Q8IYT8 1036 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 CFAP61Q8NHU2 1237 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 BICD1Q96G01 975 aa16.25■□□□□ 0.19
ATG4B-205ENST00000404914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 CYB561D2O14569 222 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 GNA15P30679 374 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PTK7Q13308 1070 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 KCNT1Q5JUK3 1230 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 SLC35B2Q8TB61 432 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 ACTL9Q8TC94 416 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 NKD2Q969F2 451 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 C20orf27Q9GZN8 174 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PPARGC1AQ9UBK2 798 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 DRG1Q9Y295 367 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PCDHB4Q9Y5E5 795 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 BUD23O43709 281 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 OTUD4Q01804 1114 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 DSG1Q02413 1049 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 USP4Q13107 963 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 KBTBD12Q3ZCT8 623 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PRPF39Q86UA1 669 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 SCUBE1Q8IWY4 988 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 TDRD3Q9H7E2 651 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 MRPL47Q9HD33 250 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 STRIP2Q9ULQ0 834 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 TELO2Q9Y4R8 837 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 TMEM191CA6NGB0 347 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 NFIBO00712 420 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 ITGAVP06756 1048 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 CCNFP41002 786 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 MRPS9P82933 396 aaKnown RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 LDHDQ86WU2 507 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PHF13Q86YI8 300 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 UNC45BQ8IWX7 931 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 PALM2Q8IXS6 379 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 CCDC110Q8TBZ0 833 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 APOPT1Q96IL0 206 aa16.24■□□□□ 0.19
ATG4B-205ENST00000404914 DMAP1Q9NPF5 467 aaPredicted RBP16.24■□□□□ 0.19
ATG4B-205ENST00000404914 A6NJR5 290 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 A8MXQ7 604 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 AVILO75366 819 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 TGDSO95455 350 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 CD48P09326 243 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 UBAP2LQ14157 1087 aaKnown RBP16.23■□□□□ 0.19
ATG4B-205ENST00000404914 GSTA3Q16772 222 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 ISLR2Q6UXK2 745 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 TAS1R3Q7RTX0 852 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 CHSY1Q86X52 802 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 ARID3BQ8IVW6 561 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-205ENST00000404914 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 NR1H4Q96RI1 486 aaPredicted RBP16.23■□□□□ 0.19
ATG4B-205ENST00000404914 TUBB6Q9BUF5 446 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 AGO4Q9HCK5 861 aaKnown RBP16.23■□□□□ 0.19
ATG4B-205ENST00000404914 KMT5AQ9NQR1 393 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 TCRBV9S1A1TA0A576 114 aa16.23■□□□□ 0.19
ATG4B-205ENST00000404914 HNRNPDLO14979 420 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms