RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 CXorf49A8MYA2 514 aaPredicted RBP21.99■■□□□ 1.11
CTCF-202ENST00000401394 TROVE2P10155 538 aaKnown RBP eCLIP21.99■■□□□ 1.11
CTCF-202ENST00000401394 MYL6P60660 151 aa21.99■■□□□ 1.11
CTCF-202ENST00000401394 WASHC2DQ5SRD0 308 aa21.99■■□□□ 1.11
CTCF-202ENST00000401394 PHF13Q86YI8 300 aaPredicted RBP21.99■■□□□ 1.11
CTCF-202ENST00000401394 MOV10L1Q9BXT6 1211 aaKnown RBP21.99■■□□□ 1.11
CTCF-202ENST00000401394 TBC1D22BQ9NU19 505 aa21.99■■□□□ 1.11
CTCF-202ENST00000401394 IP6K2Q9UHH9 426 aa21.99■■□□□ 1.11
CTCF-202ENST00000401394 HERC5Q9UII4 1024 aaKnown RBP21.99■■□□□ 1.11
CTCF-202ENST00000401394 FCHO1O14526 889 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 LYPLA2O95372 231 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 PRKCEQ02156 737 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 DPH6Q7L8W6 267 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 PDCD7Q8N8D1 485 aaKnown RBP21.98■■□□□ 1.11
CTCF-202ENST00000401394 TMEM174Q8WUU8 243 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 USP6NLQ92738 828 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 CFAP36Q96G28 342 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 TRIM55Q9BYV6 548 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 MTMR12Q9C0I1 747 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 PAPOLBQ9NRJ5 636 aaKnown RBP21.98■■□□□ 1.11
CTCF-202ENST00000401394 PCDHA10Q9Y5I2 948 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 C3orf70A6NLC5 250 aaPredicted RBP21.98■■□□□ 1.11
CTCF-202ENST00000401394 KBTBD13C9JR72 458 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 EXTL3O43909 919 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 PSMG1O95456 288 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 ESRRAP11474 423 aaPredicted RBP21.98■■□□□ 1.11
CTCF-202ENST00000401394 YWHAGP61981 247 aaKnown RBP eCLIP21.98■■□□□ 1.11
CTCF-202ENST00000401394 PTK7Q13308 1070 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 NCOA4Q13772 614 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 ADGRD1Q6QNK2 874 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 LRRC74BQ6ZQY2 392 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 CTAGE3PQ8IX95 158 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 NAT8LQ8N9F0 302 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 NSL1Q96IY1 281 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 TTC25Q96NG3 672 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 MMP19Q99542 508 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 NR2E3Q9Y5X4 410 aa21.98■■□□□ 1.11
CTCF-202ENST00000401394 TRAFD1O14545 582 aaPredicted RBP21.97■■□□□ 1.11
CTCF-202ENST00000401394 CCDC22O60826 627 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 MT-ND3P03897 115 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 OR52E8Q6IFG1 317 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 SLC35B2Q8TB61 432 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 TTC1Q99614 292 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 PXMP2Q9NR77 195 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 TCRBV9S1A1TA0A576 114 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 B2RBV5 119 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 SAMD3Q8N6K7 520 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 TTLL6Q8N841 843 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 TRIM11Q96F44 468 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 RBM41Q96IZ5 413 aaKnown RBP21.97■■□□□ 1.11
CTCF-202ENST00000401394 TLE6Q9H808 572 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 SNCAIPQ9Y6H5 919 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 DOCK5Q9H7D0 1870 aa21.97■■□□□ 1.11
CTCF-202ENST00000401394 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.96■■□□□ 1.11
CTCF-202ENST00000401394 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 SARNPP82979 210 aaKnown RBP21.96■■□□□ 1.11
CTCF-202ENST00000401394 TSNAXIP1Q2TAA8 658 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 SKA1Q96BD8 255 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 NTPCRQ9BSD7 190 aaKnown RBP21.96■■□□□ 1.11
CTCF-202ENST00000401394 MSTO1Q9BUK6 570 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 CALN1Q9BXU9 219 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 TMOD2Q9NZR1 351 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 PSMA2P25787 234 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 VHLP40337 213 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 CDH8P55286 799 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 PSMD6Q15008 389 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 DENND1BQ6P3S1 775 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 RSAD2Q8WXG1 361 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 ZWINTO95229 277 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 BAG2O95816 211 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 F7P08709 466 aaPredicted RBP21.96■■□□□ 1.11
CTCF-202ENST00000401394 POTEJP0CG39 1038 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 ACADSP16219 412 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 RASA2Q15283 850 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 DLGAP5Q15398 846 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 MRIQ9BWK5 157 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 ACSS3Q9H6R3 686 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 PCDH9Q9HC56 1237 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 CYP26B1Q9NR63 512 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 ARHGAP28Q9P2N2 729 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 SLC17A6Q9P2U8 582 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 LNPEPQ9UIQ6 1025 aa21.96■■□□□ 1.11
CTCF-202ENST00000401394 ATP2A1O14983 1001 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 LRCH4O75427 683 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 PGM1P36871 562 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 SP2Q02086 613 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 SLC27A3Q5K4L6 730 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 SLC30A9Q6PML9 568 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 ENOSF1Q7L5Y1 443 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 ARID3BQ8IVW6 561 aaPredicted RBP21.95■■□□□ 1.1
CTCF-202ENST00000401394 PPM1NQ8N819 430 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 ATP11CQ8NB49 1132 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 EBF4Q9BQW3 602 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 SLC24A2Q9UI40 661 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 SCINQ9Y6U3 715 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 TCRBV5S1A1TA0A578 114 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 KCNA3P22001 575 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 ETV4P43268 484 aa21.95■■□□□ 1.1
CTCF-202ENST00000401394 PAPOLAP51003 745 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms