RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 WDR19Q8NEZ3 1342 aa6.59□□□□□ -1.36
TRAPPC13-202ENST00000399438 POLRMTO00411 1230 aaKnown RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 DDHD2O94830 711 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 TRIM16O95361 564 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 RHOXF2BP0C7M4 288 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCNYL3P0C7X3 344 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 NR2F1P10589 423 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 C6P13671 934 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 PRCPP42785 496 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 MATR3P43243 847 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CPA2P48052 419 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCR5P51681 352 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF543Q08ER8 600 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 KRT31Q15323 416 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CNN3Q15417 329 aaKnown RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF771Q7L3S4 317 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 MOGAT3Q86VF5 341 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 BLIDQ8IZY5 108 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 FBXO15Q8NCQ5 510 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZDHHC1Q8WTX9 485 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 RHOXF2Q9BQY4 288 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CNPPD1Q9BV87 410 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 LGR4Q9BXB1 951 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 MRPL46Q9H2W6 279 aaKnown RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 MED4Q9NPJ6 270 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CD93Q9NPY3 652 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 HDAC6Q9UBN7 1215 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 FAM153AQ9UHL3 310 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 IKBKBO14920 756 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 KERAO60938 352 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 KCNH1O95259 989 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 TDP2O95551 362 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF24P17028 368 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 IDUAP35475 653 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 GPR3P46089 330 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 VEGFBP49765 207 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CNGA3Q16281 694 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZACNQ401N2 412 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 DCAF17Q5H9S7 520 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF569Q5MCW4 686 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 UBXN11Q5T124 520 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 PEAR1Q5VY43 1037 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ELMSAN1Q6PJG2 1045 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 RGS9BPQ6ZS82 235 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ANKRD53Q8N9V6 530 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 KCNN1Q92952 543 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 C18orf8Q96DM3 657 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CAPZA3Q96KX2 299 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 AK8Q96MA6 479 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 HERC2P3Q9BVR0 1158 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 TRIM7Q9C029 511 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLC39A2Q9NP94 309 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 DECR2Q9NUI1 292 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 ADPRHL2Q9NX46 363 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CALCOCO1Q9P1Z2 691 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 SERPINB13Q9UIV8 391 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 SRPK3Q9UPE1 567 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 CAB39Q9Y376 341 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 STK36Q9NRP7 1315 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 LRP5O75197 1615 aa6.58□□□□□ -1.36
TRAPPC13-202ENST00000399438 G3V3G9 751 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PRODHO43272 600 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PCNAP12004 261 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ZNF18P17022 549 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PTPN2P17706 415 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 LAG3P18627 525 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 USP8P40818 1118 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 HSPA7P48741 367 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ETV1P50549 477 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 HTD2P86397 168 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TLE2Q04725 743 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 NFIAQ12857 509 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MPEG1Q2M385 716 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 C12orf60Q5U649 245 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TAF2Q6P1X5 1199 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 SLC22A25Q6T423 547 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 KIF18BQ86Y91 864 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 POTEDQ86YR6 584 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 CAMKK1Q8N5S9 505 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ANKRD13CQ8N6S4 541 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 RNF152Q8N8N0 203 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 BCAS3Q9H6U6 928 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 DDX4Q9NQI0 724 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 COQ3Q9NZJ6 369 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 MAD2L2Q9UI95 211 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 AGO2Q9UKV8 859 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 GUCA1BQ9UMX6 200 aa6.57□□□□□ -1.36
TRAPPC13-202ENST00000399438 PASKQ96RG2 1323 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms