RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF487B1APH4 448 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DPYSL4O14531 572 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ENDOD1O94919 500 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DARSP14868 501 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GPD1P21695 349 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 STIP1P31948 543 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CHKAP35790 457 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PNPLA4P41247 253 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MAGEA4P43358 317 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MAGEA9P43362 315 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ARSEP51690 589 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MAP2K5Q13163 448 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FAM47CQ5HY64 1035 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MORN1Q5T089 497 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MAP1SQ66K74 1059 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ALKAL1Q6UXT8 129 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KCTD6Q8NC69 237 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 JOSD2Q8TAC2 188 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CHMP6Q96FZ7 201 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RBM15Q96T37 977 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TBCBQ99426 244 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ADAM7Q9H2U9 754 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 METTL5Q9NRN9 209 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 INTS9Q9NV88 658 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NINJ2Q9NZG7 142 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CNTN3Q9P232 1028 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 UBQLN1Q9UMX0 589 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GNEQ9Y223 722 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CITO14578 2027 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DCDC2CA8MYV0 355 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 APOC4-APOC2K7ER74 178 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CSDE1O75534 798 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TRUB2O95900 331 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 APOC2P02655 101 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TCF4P15884 667 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TSHRP16473 764 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PLCB3Q01970 1234 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CBLBQ13191 982 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PDK2Q15119 407 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TRIP13Q15645 432 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KYNUQ16719 465 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CCDC142Q17RM4 750 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 RALGAPA2Q2PPJ7 1873 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ARHGAP17Q68EM7 881 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TMEM110Q86TL2 294 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TDRPQ86YL5 185 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ARFGAP1Q8N6T3 406 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TEKT4Q8WW24 435 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SETD4Q9NVD3 440 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FETUBQ9UGM5 382 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 USP18Q9UMW8 372 aa18.6■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ALOX15BO15296 676 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TOMM70O94826 608 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ACSL3O95573 720 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SMIM10L2AP0DMW4 78 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SMIM10L2BP0DMW5 78 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CPT1AP50416 773 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SEC24CP53992 1094 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GPR162Q16538 588 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 FAM102AQ5T9C2 384 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GKAP1Q5VSY0 366 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CENPUQ71F23 418 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NPLOC4Q8TAT6 608 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 EPS8L3Q8TE67 593 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PPM1EQ8WY54 764 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SLC4A5Q9BY07 1137 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 UBN1Q9NPG3 1134 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 HESX1Q9UBX0 185 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TSPAN16Q9UKR8 245 aa18.59■□□□□ 0.57
HLA-DQB1-204ENST00000399084 C2CD4BA6NLJ0 364 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CST8O60676 142 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 NPTXRO95502 500 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GNAT1P11488 350 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CHN1P15882 459 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CYP3A5P20815 502 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 MIPP30301 263 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 IFI35P80217 286 aaPredicted RBP18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 GPS1Q13098 491 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 PKDCCQ504Y2 493 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 TXNRD3NBQ6F5E7 133 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 CPLX4Q7Z7G2 160 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SESTD1Q86VW0 696 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ARHGEF2Q92974 986 aaKnown RBP18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 ZNF560Q96MR9 790 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 DDX23Q9BUQ8 820 aaKnown RBP18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SENP1Q9P0U3 644 aa18.58■□□□□ 0.57
HLA-DQB1-204ENST00000399084 SGK1O00141 431 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HAS3O00219 553 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 DYNC1LI2O43237 492 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CYP2C9P11712 490 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KCNE1P15382 129 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ADAM17P78536 824 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SKIDA1Q1XH10 827 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KIZQ2M2Z5 673 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 XKR4Q5GH76 650 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RNASEH2BQ5TBB1 312 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OLFML2BQ68BL8 750 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 C4orf22Q6V702 233 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 EXOC3L1Q86VI1 746 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms