RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 REXO1L1PQ8IX06 675 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 USP6NLQ92738 828 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 POLE3Q9NRF9 147 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 DPP3Q9NY33 737 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PHTF1Q9UMS5 762 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SH3BP1Q9Y3L3 701 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 HEATR9A2RTY3 570 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 RPS6KA5O75582 802 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 EIF2S1P05198 315 aaKnown RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ETFBP38117 255 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 MAD2L1Q13257 205 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CYTH1Q15438 398 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CCDC153Q494R4 210 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 WASHC2DQ5SRD0 308 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 EIF1ADQ8N9N8 165 aaKnown RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 TMEM143Q96AN5 459 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 HPDLQ96IR7 371 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 UTP6Q9NYH9 597 aaKnown RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SYNPO2Q9UMS6 1093 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SALL1Q9NSC2 1324 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SDR42E2A6NKP2 422 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 DNAJB2P25686 324 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 KRT20P35900 424 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 NCKAP1LP55160 1127 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 BAATQ14032 418 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 IL31Q6EBC2 164 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 KCND1Q9NSA2 647 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ENOPH1Q9UHY7 261 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 TRMT6Q9UJA5 497 aaKnown RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 HPSEQ9Y251 543 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PREX1Q8TCU6 1659 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 C17orf102A2RUQ5 167 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CARNS1A5YM72 827 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 GOLGA8RI6L899 631 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 HNRNPCP07910 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 AKT1P31749 480 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 SREBF1P36956 1147 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 NCALDP61601 193 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CCNG2Q16589 344 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 MPZL3Q6UWV2 235 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 ASCC2Q9H1I8 757 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 LRRC40Q9H9A6 602 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 PALMDQ9NP74 551 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 KLHL11Q9NVR0 708 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 DTNAQ9Y4J8 743 aa8.68□□□□□ -1.02
SPTLC3-201ENST00000399002 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PRR23D1E9PI22 279 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CST8O60676 142 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SERPINI2O75830 405 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 RASSF9O75901 435 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CTDNEP1O95476 244 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PRR23D2P0DMB1 279 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 TNFRSF8P28908 595 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 ACOT2P49753 483 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 MRPS15P82914 257 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 POU4F1Q01851 419 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GRB10Q13322 594 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 NIPA1Q7RTP0 329 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GPR141Q7Z602 305 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 KIAA2013Q8IYS2 634 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 C4orf33Q8N1A6 199 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC7A5P2Q9GIP4 190 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 EFCAB1Q9HAE3 211 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 TMEM161AQ9NX61 479 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SNUPNO95149 360 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 FDPSP14324 419 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC11A2P49281 568 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 HMGCS2P54868 508 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 DAB2P98082 770 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SREBF2Q12772 1141 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PLD1Q13393 1074 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CRYMQ14894 314 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 KIZQ2M2Z5 673 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 EFCAB12Q6NXP0 572 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 DDX53Q86TM3 631 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 CENPLQ8N0S6 344 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 HES6Q96HZ4 224 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 COLEC11Q9BWP8 271 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 NOD2Q9HC29 1040 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 DIABLOQ9NR28 239 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 AAASQ9NRG9 546 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 PAIP2BQ9ULR5 123 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 MYO1GB0I1T2 1018 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 TK2O00142 265 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 SERPINB1P30740 379 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 RENBPP51606 427 aa8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 VCPP55072 806 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-201ENST00000399002 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms