RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 ADORA2BP29275 332 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ELK3P41970 407 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 NFIAQ12857 509 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 KCTD19Q17RG1 926 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 MFSD7Q6UXD7 560 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZNF572Q7Z3I7 529 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 APBB2Q92870 758 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 APOPT1Q96IL0 206 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 EFCAB1Q9HAE3 211 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 SLCO1B3Q9NPD5 702 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 DCDC2Q9UHG0 476 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 CPSF3Q9UKF6 684 aaKnown RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 AP3B1O00203 1094 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 MGRN1O60291 552 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 MAML3Q96JK9 1138 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 CHCHD3Q9NX63 227 aaKnown RBP11.5□□□□□ -0.57
HPS4-202ENST00000398145 ETAA1Q9NY74 926 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 FRMPD4Q14CM0 1322 aa11.5□□□□□ -0.57
HPS4-202ENST00000398145 KDM1AO60341 852 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 ALADP13716 330 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 STX5Q13190 355 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 MXD4Q14582 209 aaPredicted RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 DDIASQ8IXT1 998 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 DEFB107AQ8IZN7 70 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 KAT5Q92993 513 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 C3orf70A6NLC5 250 aaPredicted RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 MAN1A2O60476 641 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 AP1G2O75843 785 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 NOL4O94818 638 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 TMED10P49755 219 aaKnown RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 TKFCQ3LXA3 575 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 BNC2Q6ZN30 1099 aaPredicted RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 IFNEQ86WN2 208 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 FAM49AQ9H0Q0 323 aaPredicted RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 ASTN1O14525 1302 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 ARHGAP23Q9P227 1491 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 EML1O00423 815 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 LSM8O95777 96 aaKnown RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 FGRP09769 529 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 RARRES1P49788 294 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 RBP5P82980 135 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 PPP3CAQ08209 521 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 BMPR2Q13873 1038 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 TTC33Q6PID6 262 aaPredicted RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 CCNJLQ8IV13 435 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 FANCGO15287 622 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 C21orf2O43822 256 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 MAP3K6O95382 1288 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 ESRRBO95718 433 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 ABHD2P08910 425 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 RALBP11234 206 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 LCP1P13796 627 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
HPS4-202ENST00000398145 BNIP1Q12981 228 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.49□□□□□ -0.57
HPS4-202ENST00000398145 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 TRAPPC9Q96Q05 1148 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 ADNPQ9H2P0 1102 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 RPS6KL1Q9Y6S9 549 aa11.49□□□□□ -0.57
HPS4-202ENST00000398145 C16orf96A6NNT2 1141 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 FSCN2O14926 492 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 PAEPP09466 180 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 CNTFP26441 200 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 INPP1P49441 399 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 PDK1Q15118 436 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 ACBD5Q5T8D3 534 aaPredicted RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 LRP10Q7Z4F1 713 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 KATNAL2Q8IYT4 538 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 NT5C1AQ9BXI3 368 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
HPS4-202ENST00000398145 TMCC1O94876 653 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 APOA4P06727 396 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 CHKAP35790 457 aa11.48□□□□□ -0.57
HPS4-202ENST00000398145 SERPINB5P36952 375 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms