RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 BCAR1P56945 870 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 CYP1B1Q16678 543 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 MAP1SQ66K74 1059 aaPredicted RBP10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 TMEM176AQ96HP8 235 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 B3GNT5Q9BYG0 378 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 NIFKQ9BYG3 293 aaKnown RBP10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADARB2Q9NS39 739 aaKnown RBP10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 ASNSD1Q9NWL6 643 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 DPP3Q9NY33 737 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM47DPA6NHR8 397 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 AP3M2P53677 418 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 MPP2Q14168 576 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 SYDE1Q6ZW31 735 aaPredicted RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 FBF1Q8TES7 1133 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ACTR5Q9H9F9 607 aaPredicted RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 hCG_1818297A0A087WSY0 165 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 H3BRB1 525 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 HCRTO43612 131 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 LRCH4O75427 683 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 HOXC6P09630 235 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADORA2AP29274 412 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 SDC4P31431 198 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ROR1Q01973 937 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 SPARCL1Q14515 664 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 LENG1Q96BZ8 264 aaPredicted RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 MED10Q9BTT4 135 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ELOVL4Q9GZR5 314 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 TUT1Q9H6E5 874 aaKnown RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 PRMT7Q9NVM4 692 aaPredicted RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 DDX56Q9NY93 547 aaKnown RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 LTBP1Q14766 1721 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 A6NJR5 290 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 PMM2O15305 246 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 LGALS2P05162 132 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 KITP10721 976 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ARF4P18085 180 aaPredicted RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ZC3H12AQ5D1E8 599 aaKnown RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 CYB5D1Q6P9G0 228 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 LVRNQ6Q4G3 990 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 PARP9Q8IXQ6 854 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATXN2LQ8WWM7 1075 aaKnown RBP10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 ETNK1Q9HBU6 452 aa10.94□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 SLC25A27O95847 323 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 IQCF3P0C7M6 154 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 NUMBP49757 651 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 GPR162Q16538 588 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 WDTC1Q8N5D0 677 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 VCPIP1Q96JH7 1222 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 TXLNGYQ9BZA5 131 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 PIN4Q9Y237 131 aaKnown RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 H0Y3Z8 333 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 CREB3O43889 395 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 EZRP15311 586 aaKnown RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 KDELR1P24390 212 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ALDH3A1P30838 453 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ICAM3P32942 547 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 RPA3P35244 121 aaPredicted RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 MAP7D3Q8IWC1 876 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 OR6J1Q8NGC5 347 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 PIWIL1Q96J94 861 aaKnown RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 SDCBP2Q9H190 292 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 KAT6AQ92794 2004 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 RPL22P35268 128 aaKnown RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ASPAP45381 313 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 SESN3P58005 492 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCNA1P78396 465 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 RBP5P82980 135 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ZNF252P-AS1Q0IIN9 211 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 NME3Q13232 169 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCDC110Q8TBZ0 833 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 CCHCR1Q8TD31 782 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 NDRG1Q92597 394 aaKnown RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 PLCD4Q9BRC7 762 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADAM7Q9H2U9 754 aa10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 MARCOQ9UEW3 520 aaPredicted RBP10.93□□□□□ -0.66
CPSF1P1-201ENST00000397477 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 TCRBV7S3A2A0A539 114 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 IGF2BP3O00425 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 SAT1P21673 171 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 GPD1P21695 349 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 EIF4BP23588 611 aaKnown RBP10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 RABGGTBP53611 331 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 RAD23BP54727 409 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 VSTM1Q6UX27 236 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ALLCQ8N6M5 410 aa10.92□□□□□ -0.66
CPSF1P1-201ENST00000397477 ATP11CQ8NB49 1132 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms