RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 AP1G2O75843 785 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 SEC24AO95486 1093 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 CFHP08603 1231 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 CHRNB2P17787 502 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 IGFBP4P22692 258 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 MGAT5BQ3V5L5 792 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 TCEAL5Q5H9L2 206 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 DENND1BQ6P3S1 775 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 CCDC186Q7Z3E2 898 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 ANKRD52Q8NB46 1076 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 UBA3Q8TBC4 463 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 SLC22A17Q8WUG5 538 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 PDLIM2Q96JY6 352 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 CDCA3Q99618 268 aaPredicted RBP25■■□□□ 1.59
TSPAN4-203ENST00000397397 SEPT5Q99719 369 aaPredicted RBP25■■□□□ 1.59
TSPAN4-203ENST00000397397 CRISPLD1Q9H336 500 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 MAFFQ9ULX9 164 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 PCDHGC3Q9UN70 934 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 MTCH2Q9Y6C9 303 aa25■■□□□ 1.59
TSPAN4-203ENST00000397397 PRRG1O14668 218 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 HAPLN1P10915 354 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 TNFAIP3P21580 790 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 ZNF571Q7Z3V5 609 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 TTC30AQ86WT1 665 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 PASD1Q8IV76 773 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 KREMEN2Q8NCW0 462 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 DUSP16Q9BY84 665 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 IGFLR1Q9H665 355 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 SEPT11Q9NVA2 429 aaKnown RBP24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 FBXW11Q9UKB1 542 aa24.99■■□□□ 1.59
TSPAN4-203ENST00000397397 C1RP00736 705 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 PLEKP08567 350 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 EPCAMP16422 314 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 POU3F3P20264 500 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 GRIK1P39086 918 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 MAGEA11P43364 429 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 CACNA2D1P54289 1103 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 BCAT1P54687 386 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 FMO1Q01740 532 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 MEA1Q16626 185 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 LLGL2Q6P1M3 1020 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 VSTM1Q6UX27 236 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 SCN4BQ8IWT1 228 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 TCEAL8Q8IYN2 117 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 MAFAQ8NHW3 353 aaPredicted RBP24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 ARHGAP20Q9P2F6 1191 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 HSFX1Q9UBD0 423 aa24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 MTCL1Q9Y4B5 1905 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-203ENST00000397397 SOAT2O75908 522 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 NPR3P17342 541 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 TUFMP49411 452 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 MAP3K7CLP57077 242 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 SLC8A3P57103 927 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 BST2Q10589 180 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 SECISBP2LQ93073 1101 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 CHP1Q99653 195 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 SMOQ99835 787 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 SYT11Q9BT88 431 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 DMAP1Q9NPF5 467 aaPredicted RBP24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 TMEM30AQ9NV96 361 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 CEP83Q9Y592 693 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 HCFC2Q9Y5Z7 792 aa24.97■■□□□ 1.59
TSPAN4-203ENST00000397397 BEST1O76090 585 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 GTF2F1P35269 517 aaKnown RBP eCLIP24.96■■□□□ 1.595e-7■■■■■ 34.9
TSPAN4-203ENST00000397397 CDK17Q00537 523 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 PDE4CQ08493 712 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 HYAL1Q12794 435 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 PKDCCQ504Y2 493 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 LIN9Q5TKA1 542 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 CLEC20AQ6ZU45 233 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 CCDC149Q6ZUS6 474 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 LHX5Q9H2C1 402 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 MAN1C1Q9NR34 630 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 TRANK1O15050 2925 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 EYSQ5T1H1 3165 aa24.96■■□□□ 1.59
TSPAN4-203ENST00000397397 F8VP50 259 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 TRIM66O15016 1216 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 PTMAP06454 111 aaKnown RBP24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 SETSIPP0DME0 302 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 ANXA13P27216 316 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 EIF4A3P38919 411 aaKnown RBP24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 GPR15P49685 360 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 RPL10AP62906 217 aaKnown RBP24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 CCDC173Q0VFZ6 552 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 DDR2Q16832 855 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 TRIM72Q6ZMU5 477 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 VPS36Q86VN1 386 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 SLC7A14Q8TBB6 771 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 KCNK16Q96T55 309 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 PCDHB18PQ96TA0 734 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 PLEKHA4Q9H4M7 779 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 CSNK1G1Q9HCP0 422 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 DPP7Q9UHL4 492 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 YIPF1Q9Y548 306 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 INSL5Q9Y5Q6 135 aa24.95■■□□□ 1.59
TSPAN4-203ENST00000397397 C8AP07357 584 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 GPD2P43304 727 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 MICALL1Q8N3F8 863 aa24.95■■□□□ 1.58
TSPAN4-203ENST00000397397 TMEM35BQ8NCS4 154 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms