RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NARSO43776 548 aaKnown RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 ZNF500O60304 480 aaPredicted RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 EFEMP2O95967 443 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 CCDC175P0C221 793 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 ACO1P21399 889 aaKnown RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 KIF11P52732 1056 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 KRT83P78385 493 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 TUSC3Q13454 348 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 NAB2Q15742 525 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 ZNF571Q7Z3V5 609 aaPredicted RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 TTC39CQ8N584 583 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 UROC1Q96N76 676 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 DESI2Q9BSY9 194 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 FAM124BQ9H5Z6 455 aaPredicted RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 SMYD3Q9H7B4 428 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.15
SEC13-209ENST00000397117 WNT16Q9UBV4 365 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 DOCK6Q96HP0 2047 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 KPNA7A9QM74 516 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 EIF3CLB5ME19 914 aaKnown RBP14.08□□□□□ -0.16
SEC13-209ENST00000397117 PAPLNO95428 1278 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 CLCN1P35523 988 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 RAP1GAPP47736 663 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 CLCNKBP51801 687 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 LILRA4P59901 499 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 TAS1R1Q7RTX1 841 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 SLC47A2Q86VL8 602 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 RBBP8NLQ8NC74 664 aaPredicted RBP14.08□□□□□ -0.16
SEC13-209ENST00000397117 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 EIF3CQ99613 913 aaKnown RBP14.08□□□□□ -0.16
SEC13-209ENST00000397117 WDR6Q9NNW5 1121 aaKnown RBP14.08□□□□□ -0.16
SEC13-209ENST00000397117 SPTLC3Q9NUV7 552 aa14.08□□□□□ -0.16
SEC13-209ENST00000397117 SEPT11Q9NVA2 429 aaKnown RBP14.08□□□□□ -0.16
SEC13-209ENST00000397117 PDCD11Q14690 1871 aaKnown RBP14.07□□□□□ -0.16
SEC13-209ENST00000397117 TDRD15B5MCY1 1934 aaKnown RBP14.07□□□□□ -0.16
SEC13-209ENST00000397117 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 CCDC195A0A1B0GUA6 201 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 KRBA1A5PL33 1030 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 HUS1O60921 280 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 SOD2P04179 222 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 CYP11B1P15538 503 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 TNFAIP3P21580 790 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 CDH8P55286 799 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 SLC18A3Q16572 532 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 UPP1Q16831 310 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 KIAA0319Q5VV43 1072 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
SEC13-209ENST00000397117 SLC44A3Q8N4M1 653 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 UBR7Q8N806 425 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 ACRBPQ8NEB7 543 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 APPL2Q8NEU8 664 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 AGPAT1Q99943 283 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 HERC2P3Q9BVR0 1158 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 SEMA4AQ9H3S1 761 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 RXFP1Q9HBX9 757 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
SEC13-209ENST00000397117 MAN1C1Q9NR34 630 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 MARCH5Q9NX47 278 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 GDAP2Q9NXN4 497 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 EPS15L1Q9UBC2 864 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 ADAMTS1Q9UHI8 967 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 CNTN6Q9UQ52 1028 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 PPP2R2CQ9Y2T4 447 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 ADGRG1Q9Y653 693 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 OTOGLQ3ZCN5 2332 aa14.07□□□□□ -0.16
SEC13-209ENST00000397117 TEX28O15482 410 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 GNA15P30679 374 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 GFPT1Q06210 699 aaPredicted RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 ASTE1Q2TB18 679 aaPredicted RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 COLGALT2Q8IYK4 626 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 CCAR2Q8N163 923 aaKnown RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 C17orf53Q8N3J3 647 aaPredicted RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 EPS8L1Q8TE68 723 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 MYADMQ96S97 322 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 DNAI2Q9GZS0 605 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 TRMT1Q9NXH9 659 aaKnown RBP14.06□□□□□ -0.16
SEC13-209ENST00000397117 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 SSX2IPQ9Y2D8 614 aa14.06□□□□□ -0.16
SEC13-209ENST00000397117 C2CD2LO14523 706 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 SPTLC1O15269 473 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 B3GAT3O94766 335 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 LCA5LO95447 670 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 CFHP08603 1231 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 PAX3P23760 479 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 ZNF132P52740 706 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 CYP27A1Q02318 531 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 ZNF394Q53GI3 561 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 TAF3Q5VWG9 929 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 DCLRE1AQ6PJP8 1040 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 DSTYKQ6XUX3 929 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 KIAA1328Q86T90 577 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 ZNF677Q86XU0 584 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 GLYCTKQ8IVS8 523 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 HDAC7Q8WUI4 952 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 SLC20A1Q8WUM9 679 aa14.05□□□□□ -0.16
SEC13-209ENST00000397117 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms