RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 SAYSD1Q9NPB0 183 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 RAB21Q9UL25 225 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 KRT10P13645 584 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 ARL4CP56559 192 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 TSPAN18Q96SJ8 248 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 KRT82Q9NSB4 513 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
ATN1-202ENST00000396684 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
ATN1-202ENST00000396684 E5RJQ4 531 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 ITIH2P19823 946 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 GRK4P32298 578 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 PYROXD1Q8WU10 500 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 FAM172AQ8WUF8 416 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 CASKIN2Q8WXE0 1202 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 GLI1P08151 1106 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 LPPQ93052 612 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 TRAIPQ9BWF2 469 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 KANSL3Q9P2N6 904 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 HMGB1P1B2RPK0 211 aaPredicted RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 HOXA2O43364 376 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 CHRNB2P17787 502 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 MMP8P22894 467 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 ADCY2Q08462 1091 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 C9orf57Q5W0N0 161 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 ANKRD42Q8N9B4 389 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 SLC7A14Q8TBB6 771 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 SRRDQ9UH36 339 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 DDX20Q9UHI6 824 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 L1RE1Q9UN81 338 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 POLR2AP24928 1970 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 CPP00450 1065 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 RBP3P10745 1247 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 NCAM1P13591 858 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 COPS2P61201 443 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 SIK2Q9H0K1 926 aa12.48□□□□□ -0.41
ATN1-202ENST00000396684 ABI2Q9NYB9 513 aaPredicted RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
ATN1-202ENST00000396684 EXOC1LA0A1B0GW35 172 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 GOLGA8MH3BSY2 632 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 MAP3K7CLP57077 242 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 ITKQ08881 620 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 MORN1Q5T089 497 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SPOCD1Q6ZMY3 1216 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 ZDHHC17Q8IUH5 632 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SCUBE3Q8IX30 993 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 TMEM86AQ8N2M4 240 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SNX27Q96L92 541 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 GIT1Q9Y2X7 761 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 F8VP50 259 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 CILPO75339 1184 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 CCDC130P13994 396 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 IRF5Q13568 498 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 C6orf118Q5T5N4 469 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 MGARPQ8TDB4 240 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
ATN1-202ENST00000396684 EPAS1Q99814 870 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 FUT8Q9BYC5 575 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■■■□ 21.1
ATN1-202ENST00000396684 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
ATN1-202ENST00000396684 MARCKSL1P49006 195 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 P3H1Q32P28 736 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 LRRC57Q8N9N7 239 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 GABPB2Q8TAK5 448 aaPredicted RBP12.47□□□□□ -0.41
ATN1-202ENST00000396684 GOLGA2P5Q9HBQ8 144 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 DONSONQ9NYP3 566 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 HPCAL4Q9UM19 191 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
ATN1-202ENST00000396684 M0QYT0 321 aa12.46□□□□□ -0.41
ATN1-202ENST00000396684 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms