RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ZFYVE27Q5T4F4 411 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 TUBA3EQ6PEY2 450 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 MAGEB6Q8N7X4 407 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 HELQQ8TDG4 1101 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 FAR2Q96K12 515 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 PSKH2Q96QS6 385 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 FERMT1Q9BQL6 677 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CDH19Q9H159 772 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 MOV10Q9HCE1 1003 aaKnown RBP10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ARMC1Q9NVT9 282 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 CDH7Q9ULB5 785 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 NAALADL1Q9UQQ1 740 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ERGIC3Q9Y282 383 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 DTNAQ9Y4J8 743 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 LAMB2P55268 1798 aa10.12□□□□□ -0.79
CDRT1-204ENST00000395906 ZSCAN5BA6NJL1 495 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 TSPAN9O75954 239 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 DDHD2O94830 711 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 INHBBP09529 407 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SRGAP2CP0DJJ0 459 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SRGAP2BP0DMP2 458 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CTRB1P17538 263 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CHRNA3P32297 505 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ATP6V0D1P61421 351 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 BASP1P80723 227 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CDK16Q00536 496 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 KLHL30Q0D2K2 578 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 NXNQ6DKJ4 435 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CTRB2Q6GPI1 263 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 RNF111Q6ZNA4 994 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CYFIP1Q7L576 1253 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SGMS1Q86VZ5 419 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 BRSK1Q8TDC3 778 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 TMA16Q96EY4 203 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 DHRS9Q9BPW9 319 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CD209Q9NNX6 404 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ARHGEF4Q9NR80 690 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SACM1LQ9NTJ5 587 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 APPL1Q9UKG1 709 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 AMFRQ9UKV5 643 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 MTO1Q9Y2Z2 717 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ANGPTL3Q9Y5C1 460 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 PCDHA3Q9Y5H8 950 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ZNF804BA4D1E1 1349 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 EMSYQ7Z589 1322 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 TNS1Q9HBL0 1735 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 LINC00854A0A1B0GVQ3 168 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ZNF701M0R085 212 aaPredicted RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 NKRFO15226 690 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 FOXP2O15409 715 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CLOCKO15516 846 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ATMINO43313 823 aaPredicted RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CSDE1O75534 798 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 KRT13P13646 458 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 M6PRP20645 277 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CLK3P49761 638 aaKnown RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 NIPAL4Q0D2K0 466 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 NR1H3Q13133 447 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 GRIK5Q16478 980 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 GRAMD1BQ3KR37 738 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 CRY2Q49AN0 593 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 IYDQ6PHW0 289 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 PAOXQ6QHF9 649 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 FRA10AC1Q70Z53 315 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ADGRA1Q86SQ6 560 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 HACE1Q8IYU2 909 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SPARTQ8N0X7 666 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 RFWD2Q8NHY2 731 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 PYDC1Q8WXC3 89 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 SDCCAG3Q96C92 435 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 AIFM2Q9BRQ8 373 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 THTPAQ9BU02 230 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ERVK-5Q9HDB9 667 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 LRP2BPQ9P2M1 347 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 POLLQ9UGP5 575 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 PCYOX1Q9UHG3 505 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 ZNF532Q9HCE3 1301 aa10.11□□□□□ -0.79
CDRT1-204ENST00000395906 AKAP11Q9UKA4 1901 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 SMIM22K7EJ46 135 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 ATP8B3O60423 1300 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A9O60656 530 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 TTC4O95801 387 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A6P19224 532 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A1P22309 533 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A4P22310 534 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A3P35503 534 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 UGT1A5P35504 534 aa10.1□□□□□ -0.79
CDRT1-204ENST00000395906 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
CDRT1-204ENST00000395906 NPEPPSP55786 919 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms