RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 PNPLA4P41247 253 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 SMAD3P84022 425 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 MGAT3Q09327 533 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 ACAP1Q15027 740 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 PTPN20Q4JDL3 420 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 C2CD6Q53TS8 623 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 AADACL2Q6P093 401 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 CCDC137Q6PK04 289 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 LCLAT1Q6UWP7 414 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 POLNQ7Z5Q5 900 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 ZDHHC14Q8IZN3 488 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 IQCKQ8N0W5 287 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 GOLGA6L1Q8N7Z2 621 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 RBM41Q96IZ5 413 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 ZMAT2Q96NC0 199 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 TWNKQ96RR1 684 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 SH3GL2Q99962 352 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 HINFPQ9BQA5 517 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 CELF4Q9BZC1 486 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 DNAI2Q9GZS0 605 aa15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 PIN4Q9Y237 131 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-203ENST00000395881 CHD9Q3L8U1 2897 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 AGPSO00116 658 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 GPD2P43304 727 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 RPL7AP62424 266 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 LLGL2Q6P1M3 1020 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 RSPH3Q86UC2 560 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 TMEM40Q8WWA1 233 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 ZNF560Q96MR9 790 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 DDX56Q9NY93 547 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 MICAL3Q7RTP6 2002 aa15.2■□□□□ 0.02
RTFDC1-203ENST00000395881 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 M0QZ92 97 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PIRO00625 290 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 DAPK3O43293 454 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 MICAL2O94851 1124 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 FAM153BP0C7A2 387 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 NDST1P52848 882 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TAS2R40P59535 323 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 MRPS6P82932 125 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 KLF1Q13351 362 aaPredicted RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 FAM153CQ494X1 144 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 C9orf57Q5W0N0 161 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TSEN2Q8NCE0 465 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GRK7Q8WTQ7 553 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 HEXIM2Q96MH2 286 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 MCEEQ96PE7 176 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 MTIF3Q9H2K0 278 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 NXF3Q9H4D5 531 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 CHST12Q9NRB3 414 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 ST7Q9NRC1 585 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GDAP2Q9NXN4 497 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PSD3Q9NYI0 1048 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 FAM153AQ9UHL3 310 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 EFR3BQ9Y2G0 817 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 SCN1AP35498 2009 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 SMIM28A0A1B0GU29 152 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GOLGA8KD6RF30 607 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 KRT3P12035 628 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GGCXP38435 758 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PBX2P40425 430 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 SNX16P57768 344 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 ZNF252P-AS1Q0IIN9 211 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PDCLQ13371 301 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TRADDQ15628 312 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PLEKHG4Q58EX7 1191 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 CFAP58Q5T655 872 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TTC27Q6P3X3 843 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 LRIG3Q6UXM1 1119 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 ADAT2Q7Z6V5 191 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 PHLDB2Q86SQ0 1253 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 DBF4BQ8NFT6 615 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 STK32AQ8WU08 396 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 EXOC4Q96A65 974 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 RUFY1Q96T51 708 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 HMGXB4Q9UGU5 601 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 CYTH4Q9UIA0 394 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TRPV2Q9Y5S1 764 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
RTFDC1-203ENST00000395881 TCRBV7S2A1N4TA0A589 114 aa15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
RTFDC1-203ENST00000395881 ECEL1O95672 775 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms