RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PTPRDP23468 1912 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 BUB1BO60566 1050 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 CDR1P51861 262 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 SNX16P57768 344 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 MAMLD1Q13495 774 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 DNAJC24Q6P3W2 148 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 FAM35AQ86V20 835 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 STK32AQ8WU08 396 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 B3GALT6Q96L58 329 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 KRT82Q9NSB4 513 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 ANAPC7Q9UJX3 599 aa21.56■■□□□ 1.04
VCPKMT-202ENST00000395860 CARNS1A5YM72 827 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 URI1O94763 535 aaPredicted RBP21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 FTCDO95954 541 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 ATP1A1P05023 1023 aaKnown RBP21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 FAM200BP0CF97 657 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 NPR3P17342 541 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 CTXN3Q4LDR2 81 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 ZNF280DQ6N043 979 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 XYLT1Q86Y38 959 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 C3orf20Q8ND61 904 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 PKMYT1Q99640 499 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 SELENOOQ9BVL4 669 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC4A5Q9BY07 1137 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 GOLPH3Q9H4A6 298 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC4A7Q9Y6M7 1214 aa21.55■■□□□ 1.04
VCPKMT-202ENST00000395860 E5RJQ4 531 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 PIK3R2O00459 728 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 XPO1O14980 1071 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 GSCP56915 257 aaPredicted RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 MRPL58Q14197 206 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 ZNF268Q14587 947 aaPredicted RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 MESDQ14696 234 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 SLFN11Q7Z7L1 901 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 LRRTM3Q86VH5 581 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 DCP1BQ8IZD4 617 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 COLGALT1Q8NBJ5 622 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 SMARCD1Q96GM5 515 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 BTBD6Q96KE9 485 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC9A7Q96T83 725 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 TTPALQ9BTX7 342 aa21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 MTIF3Q9H2K0 278 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-202ENST00000395860 TCRBV5S1A1TA0A578 114 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TMEM110-MUSTN1A8MSY1 372 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 GOLGA8SH3BPF8 625 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 CAPN15O75808 1086 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 AP1G2O75843 785 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 PLA2G4AP47712 749 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 HTRA4P83105 476 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 RTP2Q5QGT7 225 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 C11orf63Q6NUN7 778 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 CLEC20AQ6ZU45 233 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 PEX26Q7Z412 305 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 FEZF2Q8TBJ5 459 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TMEM169Q96HH4 297 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 ZCWPW1Q9H0M4 648 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 CYLDQ9NQC7 956 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TMLHEQ9NVH6 421 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 INSL6Q9Y581 213 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 H7C4K7 107 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 GJB6O95452 261 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 OR4Q2P0C623 313 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 MAP3K7CLP57077 242 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TAP1Q03518 808 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 USP41Q3LFD5 358 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 MEI1Q5TIA1 1274 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 OR6B2Q6IFH4 312 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 DCUN1D2Q6PH85 259 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 C4orf50Q6ZRC1 276 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 ANKS3Q6ZW76 656 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TAS1R1Q7RTX1 841 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 TMEM110Q86TL2 294 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 SPATA2LQ8IUW3 424 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC39A11Q8N1S5 342 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 HSFY1Q96LI6 401 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 AAASQ9NRG9 546 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 AMFRQ9UKV5 643 aa21.53■■□□□ 1.04
VCPKMT-202ENST00000395860 OR6C75A6NL08 312 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 MYO1FO00160 1098 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 NCK2O43639 380 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 BEST1O76090 585 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 EFEMP2O95967 443 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 ACADSBP45954 432 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 PTPROQ16827 1216 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 SLC39A12Q504Y0 691 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 PIGZQ86VD9 579 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 HERC6Q8IVU3 1022 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 FIBCD1Q8N539 461 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 PHOSPHO2Q8TCD6 241 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 MCRS1Q96EZ8 462 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 MCEEQ96PE7 176 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 SPG21Q9NZD8 308 aa21.52■■□□□ 1.04
VCPKMT-202ENST00000395860 KRT3P12035 628 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 BDNFP23560 247 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 RPL34P49207 117 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 PAPD7Q5XG87 772 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 FAM183BPQ6ZVS7 135 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 NT5DC3Q86UY8 548 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 RNF168Q8IYW5 571 aaPredicted RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 SMOQ99835 787 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms