RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 OPA3Q9H6K4 179 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 WDR26Q9H7D7 661 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SLC39A1Q9NY26 324 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SERPINB13Q9UIV8 391 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 FGD6Q6ZV73 1430 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRBV23OR9-2A0A075B6M9 112 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 A0A1W2PRU2 124 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TARSL2A2RTX5 802 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 KPNA7A9QM74 516 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DNALI1O14645 258 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 SNPHO15079 494 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 GALTP07902 379 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 EDN3P14138 238 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 U2AF2P26368 475 aaKnown RBP eCLIP4.47□□□□□ -1.694e-7■■■□□ 16.6
HERC4-204ENST00000395198 RFC2P35250 354 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 GCKP35557 465 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PTGIRP43119 386 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DNM1Q05193 864 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 KLF1Q13351 362 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERC4-204ENST00000395198 CYP2A13Q16696 494 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 AOC3Q16853 763 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 OXLD1Q5BKU9 147 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 RTP2Q5QGT7 225 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SHEQ5VZ18 495 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 KANK2Q63ZY3 851 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CYB5D1Q6P9G0 228 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRIM72Q6ZMU5 477 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CATSPERGQ6ZRH7 1159 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 HTR3DQ70Z44 454 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ARMCX2Q7L311 632 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CEP57Q86XR8 500 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 LIX1LQ8IVB5 337 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 HERC6Q8IVU3 1022 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 HIPK4Q8NE63 616 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRAPPC12Q8WVT3 735 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 GFM2Q969S9 779 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 SNF8Q96H20 258 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ART5Q96L15 291 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 C7orf26Q96N11 449 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 KIFC3Q9BVG8 833 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 BTBD2Q9BX70 525 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 NFKBIZQ9BYH8 718 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 RABGEF1Q9UJ41 708 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 C2orf72A6NCS6 295 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 POTECB2RU33 542 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRAPPC3O43617 180 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PF4P02776 101 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CYP2E1P05181 493 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 RAD23AP54725 363 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 HAND2P61296 217 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 VBP1P61758 197 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 BTKQ06187 659 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 XRCC4Q13426 336 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 E2F2Q14209 437 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 LILRA6Q6PI73 481 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CNTN4Q8IWV2 1026 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PHC2Q8IXK0 858 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 HACE1Q8IYU2 909 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 KRT78Q8N1N4 520 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ZNF527Q8NB42 609 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 LIPHQ8WWY8 451 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 GTF3C6Q969F1 213 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 VPS33AQ96AX1 596 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SPDL1Q96EA4 605 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CDCA5Q96FF9 252 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CNOT6LQ96LI5 555 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 TMEM68Q96MH6 324 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TBCDQ9BTW9 1192 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PUS3Q9BZE2 481 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 RNF38Q9H0F5 515 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 UCKL1Q9NWZ5 548 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 MAD2L2Q9UI95 211 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SLC13A4Q9UKG4 626 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PCDHB4Q9Y5E5 795 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 PIAS3Q9Y6X2 628 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 NCOA2Q15596 1464 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PRXQ9BXM0 1461 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 DHX57Q6P158 1386 aaKnown RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 SERTM2A0A1B0GWG4 89 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 LRRIQ3A6PVS8 624 aaPredicted RBP4.47□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8BA8MQT2 603 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PSMD14O00487 310 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 SCAMP1O15126 338 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ATP8B1O43520 1251 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PHF2O75151 1096 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 CTAG2O75638 210 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TUSC2O75896 110 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 RARBP10826 455 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 PDCP20941 246 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 BMI1P35226 326 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 TRIM23P36406 574 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 ZNF445P59923 1031 aa4.47□□□□□ -1.69
HERC4-204ENST00000395198 OLR1P78380 273 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms