RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 SPTLC2O15270 562 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 GDF9O60383 454 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 DLATP10515 647 aaKnown RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 BDNFP23560 247 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 GJA4P35212 333 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 IFNAR2P48551 515 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 GALK1P51570 392 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 ZNF268Q14587 947 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 ZNF77Q15935 545 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 E2F4Q16254 413 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 FOXD4L6Q3SYB3 417 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 FOXD4L3Q6VB84 417 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 SPATA18Q8TC71 538 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 MYRFLQ96LU7 910 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 HHIPQ96QV1 700 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 MMS19Q96T76 1030 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 TRIM9Q9C026 710 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 DUS2Q9NX74 493 aaKnown RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 MAGEC2Q9UBF1 373 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-204ENST00000395194 SLC8A2Q9UPR5 921 aa20.61■□□□□ 0.89
COL11A2-204ENST00000395194 EPG5Q9HCE0 2579 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.6■□□□□ 0.89
COL11A2-204ENST00000395194 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
COL11A2-204ENST00000395194 KIAA0391O15091 583 aaKnown RBP20.6■□□□□ 0.89
COL11A2-204ENST00000395194 AXIN1O15169 862 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 CLIC2O15247 247 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 USP17L7P0C7H9 530 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 CASP1P29466 404 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 CYP2J2P51589 502 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 CYP27A1Q02318 531 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 USP4Q13107 963 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 KCNB1Q14721 858 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 PDGFRLQ15198 375 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 FAM171BQ6P995 826 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 C4orf50Q6ZRC1 276 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 NELFCDQ8IXH7 590 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 CPA6Q8N4T0 437 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 NETO1Q8TDF5 533 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 FUBP3Q96I24 572 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL11A2-204ENST00000395194 P2RY13Q9BPV8 354 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 MRPL45Q9BRJ2 306 aaKnown RBP20.6■□□□□ 0.89
COL11A2-204ENST00000395194 ECT2Q9H8V3 914 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 KBTBD4Q9NVX7 518 aa20.6■□□□□ 0.89
COL11A2-204ENST00000395194 MYH10P35580 1976 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 LRP3O75074 770 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 CCDC192P0DO97 292 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 KCNA4P22459 653 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 GRIK1P39086 918 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 USP46P62068 366 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 PSMD2Q13200 908 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 SURF1Q15526 300 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 CSRP2Q16527 193 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 MDH1BQ5I0G3 518 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 FAM26FQ5R3K3 315 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 KBTBD6Q86V97 674 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 WDR49Q8IV35 697 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 FSIP1Q8NA03 581 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 RPLP0P6Q8NHW5 317 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 SH3RF2Q8TEC5 729 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 OSCP1Q8WVF1 389 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 ARRDC1-AS1Q9H2J1 176 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 GCNT4Q9P109 453 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 CDH9Q9ULB4 789 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 NME7Q9Y5B8 376 aa20.59■□□□□ 0.89
COL11A2-204ENST00000395194 SOBPA7XYQ1 873 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 RPP40O75818 363 aaKnown RBP20.58■□□□□ 0.89
COL11A2-204ENST00000395194 TNNI1P19237 187 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 WARSP23381 471 aaKnown RBP20.58■□□□□ 0.89
COL11A2-204ENST00000395194 HOXA6P31267 233 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 MAGEA11P43364 429 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 AMPD2Q01433 879 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 SNRNP35Q16560 246 aaKnown RBP20.58■□□□□ 0.89
COL11A2-204ENST00000395194 EML3Q32P44 896 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 SHC4Q6S5L8 630 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 DPH6Q7L8W6 267 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 LIMS2Q7Z4I7 341 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 ABCA7Q8IZY2 2146 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 GAB3Q8WWW8 586 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 EZH1Q92800 747 aaPredicted RBP20.58■□□□□ 0.89
COL11A2-204ENST00000395194 CCDC127Q96BQ5 260 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 PCED1BQ96HM7 432 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 LRRC27Q9C0I9 530 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 BLZF1Q9H2G9 400 aa20.58■□□□□ 0.89
COL11A2-204ENST00000395194 CHD8Q9HCK8 2581 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 SCAMP3O14828 347 aaKnown RBP20.57■□□□□ 0.88
COL11A2-204ENST00000395194 SLC30A4O14863 429 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 EIF3DO15371 548 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL11A2-204ENST00000395194 TGFB1I1O43294 461 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 ATG13O75143 517 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 PPP6R2O75170 966 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 HDCP19113 662 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 DRD1P21728 446 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 ANXA13P27216 316 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 SF3A2Q15428 464 aaKnown RBP20.57■□□□□ 0.88
COL11A2-204ENST00000395194 DENND5BQ6ZUT9 1274 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 EPM2AIP1Q7L775 607 aaPredicted RBP20.57■□□□□ 0.88
COL11A2-204ENST00000395194 CD101Q93033 1021 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 ZNF396Q96N95 335 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms