RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 MYO9BQ13459 2157 aa9.02□□□□□ -0.97
HERC4-203ENST00000395185 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 KPNA7A9QM74 516 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 I3L4J1 428 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 M0QZQ0 153 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 DDX3XO00571 662 aaKnown RBP eCLIP9.01□□□□□ -0.97
HERC4-203ENST00000395185 PRRG1O14668 218 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CYP26A1O43174 497 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 XYLBO75191 536 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CYP11A1P05108 521 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 KRT19P08727 400 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 PAEPP09466 180 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CCDC172P0C7W6 258 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 SPATA31D3P0C874 917 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 PNMA6AP0CW24 399 aaPredicted RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 ODC1P11926 461 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CYP11B1P15538 503 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 RPL17P18621 184 aaKnown RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 BRCC3P46736 316 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 TAF6P49848 677 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 RAD23BP54727 409 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CDH8P55286 799 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ARPP19P56211 112 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 BPIFB4P59827 614 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 YWHAHQ04917 246 aaPredicted RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 ZP2Q05996 745 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 KLHL30Q0D2K2 578 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 MTF1Q14872 753 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ASIC2Q16515 512 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ARHGAP44Q17R89 818 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 CTXN3Q4LDR2 81 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 PPM1LQ5SGD2 360 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 TPGS2Q68CL5 300 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ZNF280DQ6N043 979 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 SPATA31D4Q6ZUB0 917 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 OTOP3Q7RTS5 596 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 UNC93AQ86WB7 457 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 TOP6BLQ8N6T0 577 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ZNF461Q8TAF7 563 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 CLSTN3Q9BQT9 956 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 C1QTNF1Q9BXJ1 281 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 HAUS4Q9H6D7 363 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 SMYD3Q9H7B4 428 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 MTRRQ9UBK8 725 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 ADGRG1Q9Y653 693 aa9.01□□□□□ -0.97
HERC4-203ENST00000395185 PRRC2BQ5JSZ5 2229 aaKnown RBP9.01□□□□□ -0.97
HERC4-203ENST00000395185 CITO14578 2027 aa9□□□□□ -0.97
HERC4-203ENST00000395185 A0A087X0T9 212 aa9□□□□□ -0.97
HERC4-203ENST00000395185 OR6C75A6NL08 312 aa9□□□□□ -0.97
HERC4-203ENST00000395185 CYB561D2O14569 222 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ZMYND10O75800 440 aa9□□□□□ -0.97
HERC4-203ENST00000395185 OAZ2O95190 189 aa9□□□□□ -0.97
HERC4-203ENST00000395185 NDUFA10O95299 355 aa9□□□□□ -0.97
HERC4-203ENST00000395185 HNRNPA1P09651 372 aaKnown RBP eCLIP9□□□□□ -0.97
HERC4-203ENST00000395185 FAM228BP0C875 321 aa9□□□□□ -0.97
HERC4-203ENST00000395185 GZMAP12544 262 aa9□□□□□ -0.97
HERC4-203ENST00000395185 P4HA1P13674 534 aa9□□□□□ -0.97
HERC4-203ENST00000395185 TYMPP19971 482 aa9□□□□□ -0.97
HERC4-203ENST00000395185 WARSP23381 471 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 YWHAEP62258 255 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
HERC4-203ENST00000395185 CDR2Q01850 454 aa9□□□□□ -0.97
HERC4-203ENST00000395185 SLC18A3Q16572 532 aa9□□□□□ -0.97
HERC4-203ENST00000395185 SV2CQ496J9 727 aa9□□□□□ -0.97
HERC4-203ENST00000395185 NOP9Q86U38 636 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 SLC47A2Q86VL8 602 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ZSCAN30Q86W11 494 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ZNF677Q86XU0 584 aa9□□□□□ -0.97
HERC4-203ENST00000395185 REXO1L1PQ8IX06 675 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ELMOD1Q8N336 334 aa9□□□□□ -0.97
HERC4-203ENST00000395185 SLC4A11Q8NBS3 891 aa9□□□□□ -0.97
HERC4-203ENST00000395185 TFAP2BQ92481 460 aa9□□□□□ -0.97
HERC4-203ENST00000395185 SMG7Q92540 1137 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 SENP8Q96LD8 212 aa9□□□□□ -0.97
HERC4-203ENST00000395185 CCDC42Q96M95 316 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ZNF560Q96MR9 790 aa9□□□□□ -0.97
HERC4-203ENST00000395185 TWNKQ96RR1 684 aa9□□□□□ -0.97
HERC4-203ENST00000395185 PCDHB18PQ96TA0 734 aa9□□□□□ -0.97
HERC4-203ENST00000395185 AGPAT1Q99943 283 aa9□□□□□ -0.97
HERC4-203ENST00000395185 MRPL45Q9BRJ2 306 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 RHOBTB2Q9BYZ6 727 aa9□□□□□ -0.97
HERC4-203ENST00000395185 PRKD2Q9BZL6 878 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ELOVL4Q9GZR5 314 aa9□□□□□ -0.97
HERC4-203ENST00000395185 ACP6Q9NPH0 428 aa9□□□□□ -0.97
HERC4-203ENST00000395185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.973e-11■■■■□ 20.8
HERC4-203ENST00000395185 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
HERC4-203ENST00000395185 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
HERC4-203ENST00000395185 KIAA1257Q9ULG3 409 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms