RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 PCDHA3Q9Y5H8 950 aa25.91■■□□□ 1.74
CTF1-202ENST00000395019 MAN1A1P33908 653 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 LHX1P48742 406 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 PEX5P50542 639 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 PSMC1P62191 440 aaKnown RBP25.9■■□□□ 1.74
CTF1-202ENST00000395019 NOMO2Q5JPE7 1267 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 DCAF12L1Q5VU92 463 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 CD300LGQ6UXG3 332 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 XYLT1Q86Y38 959 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 CPNE8Q86YQ8 564 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 SPATA18Q8TC71 538 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 URGCPQ8TCY9 931 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 IPO4Q8TEX9 1081 aaKnown RBP25.9■■□□□ 1.74
CTF1-202ENST00000395019 ALG3Q92685 438 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 KRT35Q92764 455 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 SYNCQ9H7C4 482 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 KANSL3Q9P2N6 904 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 TJP2Q9UDY2 1190 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 IP6K2Q9UHH9 426 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 TTC7AQ9ULT0 858 aaPredicted RBP25.9■■□□□ 1.74
CTF1-202ENST00000395019 SLC4A7Q9Y6M7 1214 aa25.9■■□□□ 1.74
CTF1-202ENST00000395019 SIGLEC16A6NMB1 481 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 B4GALT3O60512 393 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 DGKIO75912 1065 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 B3GAT3O94766 335 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 GJB6O95452 261 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 RPL7AP62424 266 aaKnown RBP25.89■■□□□ 1.74
CTF1-202ENST00000395019 C2orf54Q08AI8 447 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 PAN2Q504Q3 1202 aaKnown RBP25.89■■□□□ 1.74
CTF1-202ENST00000395019 TIGD5Q53EQ6 642 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 DCLRE1AQ6PJP8 1040 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 MMGT1Q8N4V1 131 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 B3GALNT2Q8NCR0 500 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.89■■□□□ 1.74
CTF1-202ENST00000395019 MCRS1Q96EZ8 462 aa25.89■■□□□ 1.74
CTF1-202ENST00000395019 RNPC3Q96LT9 517 aaKnown RBP25.89■■□□□ 1.74
CTF1-202ENST00000395019 RC3H2Q9HBD1 1191 aaKnown RBP25.89■■□□□ 1.74
CTF1-202ENST00000395019 DSC1Q08554 894 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 DCUN1D2Q6PH85 259 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 ANKRD52Q8NB46 1076 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 STK32AQ8WU08 396 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 SLC35F5Q8WV83 523 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 MCEEQ96PE7 176 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 LPIN3Q9BQK8 851 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 GRXCR1A8MXD5 290 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 PGRMC1O00264 195 aaKnown RBP25.88■■□□□ 1.73
CTF1-202ENST00000395019 CCDC130P13994 396 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 MARCKSL1P49006 195 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 SLC4A5Q9BY07 1137 aa25.88■■□□□ 1.73
CTF1-202ENST00000395019 DDX43Q9NXZ2 648 aaKnown RBP25.88■■□□□ 1.73
CTF1-202ENST00000395019 TBKBP1A7MCY6 615 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 GJB5O95377 273 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 ODC1P11926 461 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 KRT3P12035 628 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 PTPN1P18031 435 aaKnown RBP25.87■■□□□ 1.73
CTF1-202ENST00000395019 BCAT1P54687 386 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 ZNF689Q96CS4 500 aaPredicted RBP25.87■■□□□ 1.73
CTF1-202ENST00000395019 HNRNPABQ99729 332 aaKnown RBP25.87■■□□□ 1.73
CTF1-202ENST00000395019 TMEM59LQ9UK28 342 aa25.87■■□□□ 1.73
CTF1-202ENST00000395019 GOLGA8SH3BPF8 625 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 M0QZQ0 153 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 CYP11A1P05108 521 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 ATP2A2P16615 1042 aaKnown RBP25.86■■□□□ 1.73
CTF1-202ENST00000395019 RNASE9P60153 205 aaKnown RBP25.86■■□□□ 1.73
CTF1-202ENST00000395019 PDE4CQ08493 712 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 BST2Q10589 180 aaKnown RBP25.86■■□□□ 1.73
CTF1-202ENST00000395019 PMF1Q6P1K2 205 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 TMEM110Q86TL2 294 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 HERC6Q8IVU3 1022 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 EPC1Q9H2F5 836 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 ST7Q9NRC1 585 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 TBC1D13Q9NVG8 400 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 DSEQ9UL01 958 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 CHD9Q3L8U1 2897 aa25.86■■□□□ 1.73
CTF1-202ENST00000395019 DDHD2O94830 711 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ADORA2BP29275 332 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 RABGGTBP53611 331 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 RWDD2BP57060 319 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 SNX16P57768 344 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 PIGHQ14442 188 aaPredicted RBP25.85■■□□□ 1.73
CTF1-202ENST00000395019 CLUL1Q15846 466 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ZNF280BQ86YH2 543 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 COLGALT2Q8IYK4 626 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 NIPA2Q8N8Q9 360 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 SLC2A14Q8TDB8 520 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 FNIP1Q8TF40 1166 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 SLC9A7Q96T83 725 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ANKZF1Q9H8Y5 726 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 RBM12Q9NTZ6 932 aaKnown RBP25.85■■□□□ 1.73
CTF1-202ENST00000395019 NLRC5Q86WI3 1866 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 CHD7Q9P2D1 2997 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ARHGEF37A1IGU5 675 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 E5RJQ4 531 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 TULP2O00295 520 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ATP2C2O75185 946 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ACAT1P24752 427 aaKnown RBP25.85■■□□□ 1.73
CTF1-202ENST00000395019 BRCC3P46736 316 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 OGDHQ02218 1023 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 ZNF252P-AS1Q0IIN9 211 aa25.85■■□□□ 1.73
CTF1-202ENST00000395019 KIAA0319Q5VV43 1072 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms