RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 C1orf131Q8NDD1 294 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 AGBL3Q8NEM8 1001 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 GRAMD1AQ96CP6 724 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 MMP19Q99542 508 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 BTBD10Q9BSF8 475 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CADM1Q9BY67 442 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 ADAM7Q9H2U9 754 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 EHMT1Q9H9B1 1298 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 BAZ2AQ9UIF9 1905 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 F8VP50 259 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 AHCYL1O43865 530 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 RNF8O76064 485 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 HSPA4LO95757 839 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 CIITAP33076 1130 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 RGS7P49802 495 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 FKBP1AP62942 108 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 FAAP100Q0VG06 881 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 OASLQ15646 514 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 MFSD4BQ5TF39 518 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 C16orf87Q6PH81 154 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 CLNKQ7Z7G1 428 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
RTN4-206ENST00000394611 SNX31Q8N9S9 440 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 ATP11CQ8NB49 1132 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 FBXL13Q8NEE6 735 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 AURKCQ9UQB9 309 aa9.22□□□□□ -0.93
RTN4-206ENST00000394611 IQANK1A0A1B0GTG1 560 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 CAPN8A6NHC0 703 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 GOLGA8TH3BQL2 631 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 XPOTO43592 962 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 NUDT17P0C025 328 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 GAP43P17677 238 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 NUDT2P50583 147 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 RTP1P59025 263 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 RPL7AP62424 266 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 MRPS22P82650 360 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 ART3Q13508 389 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 NCOA4Q13772 614 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 KRT39Q6A163 491 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 TLDC1Q6P9B6 456 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 BBOF1Q8ND07 529 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 DEPTORQ8TB45 409 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 ROPN1BQ9BZX4 212 aaPredicted RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 SUDS3Q9H7L9 328 aaPredicted RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 ROPN1Q9HAT0 212 aaPredicted RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 KCNN4O15554 427 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 ZBED1O96006 694 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 SLC4A1P02730 911 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 RBP3P10745 1247 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 RPA1P27694 616 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 TAS2R40P59535 323 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 CARTPTQ16568 116 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 LGSNQ5TDP6 509 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 VWA5B1Q5TIE3 1220 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 DPY19L2Q6NUT2 758 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 MFN1Q8IWA4 741 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 DNAAF3Q8N9W5 541 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 FAM81AQ8TBF8 368 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 SEC14L1Q92503 715 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 FAM149B1Q96BN6 582 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 FAM136AQ96C01 138 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 MTA3Q9BTC8 594 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 DHX35Q9H5Z1 703 aaKnown RBP9.21□□□□□ -0.93
RTN4-206ENST00000394611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.21□□□□□ -0.93
RTN4-206ENST00000394611 CYLDQ9NQC7 956 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 NR2E3Q9Y5X4 410 aa9.21□□□□□ -0.93
RTN4-206ENST00000394611 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
RTN4-206ENST00000394611 PRR5-ARHGAP8B1AHC4 643 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 TGFB1I1O43294 461 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 EYA4O95677 639 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 RAG1P15918 1043 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 GLRBP48167 497 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.94
RTN4-206ENST00000394611 ARHGAP8P85298 464 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 PLIN5Q00G26 463 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 SESTD1Q86VW0 696 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 ACTL9Q8TC94 416 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 GDPD5Q8WTR4 605 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 TMEM143Q96AN5 459 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 PAGR1Q9BTK6 254 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 EBF3Q9H4W6 596 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 IVNS1ABPQ9Y6Y0 642 aa9.21□□□□□ -0.94
RTN4-206ENST00000394611 C5orf60A6NFR6 353 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 GIPC1O14908 333 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 MAGEB3O15480 346 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 TCF4P15884 667 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 GMPRP36959 345 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 PSMD7P51665 324 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 CDH6P55285 790 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 GRAMD4Q6IC98 578 aa9.2□□□□□ -0.94
RTN4-206ENST00000394611 RBM44Q6ZP01 1051 aaKnown RBP9.2□□□□□ -0.94
RTN4-206ENST00000394611 ZDHHC14Q8IZN3 488 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms