RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ALLCQ8N6M5 410 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 TJP2Q9UDY2 1190 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 IP6K2Q9UHH9 426 aa16.31■□□□□ 0.2
PTBP1-204ENST00000394601 LAMTOR4Q0VGL1 99 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 OVGP1Q12889 678 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 BNIP1Q12981 228 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 RCN1Q15293 331 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 TMED2Q15363 201 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 IZUMO3Q5VZ72 239 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 ECHDC2Q86YB7 292 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 ITFG2Q969R8 447 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 RNPEPL1Q9HAU8 725 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 NAALADL1Q9UQQ1 740 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 POC1B-GALNT4F8VUJ3 575 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
PTBP1-204ENST00000394601 IQCF3P0C7M6 154 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 CALB2P22676 271 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 ALDH3A1P30838 453 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 CDKN2BP42772 138 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 P3H1Q32P28 736 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 RCOR2Q8IZ40 523 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 MCEEQ96PE7 176 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 hCG_1818297A0A087WSY0 165 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 A6NHS1 94 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 SMAPO00193 183 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 MDH1BQ5I0G3 518 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 MFN1Q8IWA4 741 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 CCDC89Q8N998 374 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 UTP4Q969X6 686 aaKnown RBP16.3■□□□□ 0.2
PTBP1-204ENST00000394601 C9orf72Q96LT7 481 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 LRRC37BQ96QE4 947 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 GPR20Q99678 358 aa16.3■□□□□ 0.2
PTBP1-204ENST00000394601 STMN4Q9H169 189 aaPredicted RBP16.3■□□□□ 0.2
PTBP1-204ENST00000394601 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 CCNFP41002 786 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 SLC25A11Q02978 314 aaKnown RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 FASTKD3Q14CZ7 662 aaKnown RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 TRIM50Q86XT4 487 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 CKAP2Q8WWK9 683 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 RAB3IPQ96QF0 476 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 PRKAG3Q9UGI9 489 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 PPP2R3BQ9Y5P8 575 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 ABHD2P08910 425 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 AP3M2P53677 418 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 MGAT5Q09328 741 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 TAZQ16635 292 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 SPOCD1Q6ZMY3 1216 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 C4orf33Q8N1A6 199 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 ACSF2Q96CM8 615 aaPredicted RBP16.29■□□□□ 0.2
PTBP1-204ENST00000394601 TBC1D10AQ9BXI6 508 aa16.29■□□□□ 0.2
PTBP1-204ENST00000394601 DNALI1O14645 258 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 BAG6P46379 1132 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 MRPS35P82673 323 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 GALNTL6Q49A17 601 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 ANKLE1Q8NAG6 615 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 DRG1Q9Y295 367 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 EVPLQ92817 2033 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 KRT36O76013 467 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 GJB1P08034 283 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 TGFB3P10600 412 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 IL1R2P27930 398 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 ZBTB16Q05516 673 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 PPP1R2P3Q6NXS1 205 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 SEPT1Q8WYJ6 367 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 WDR83Q9BRX9 315 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 MRPL4Q9BYD3 311 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 CAPN9O14815 690 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 OGTO15294 1046 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 OPHN1O60890 802 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 TPBGLP0DKB5 382 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 PSMC4P43686 418 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 EFNA5P52803 228 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 PTPN20Q4JDL3 420 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 KHDC1Q4VXA5 237 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 RNASEH2BQ5TBB1 312 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 CYP4A22Q5TCH4 519 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 IER5Q5VY09 327 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms