RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CHST7Q9NS84 486 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 ALKQ9UM73 1620 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TYROBPO43914 113 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 FARP2O94887 1054 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 JAK1P23458 1154 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 HOXD10P28358 340 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 IFNA8P32881 189 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 STAT4Q14765 748 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 RALGPS2Q86X27 583 aaPredicted RBP13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 NUF2Q9BZD4 464 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 VPS37BQ9H9H4 285 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 IGSF9Q9P2J2 1179 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 BCAP29Q9UHQ4 241 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 TAGLN3Q9UI15 199 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
SLC28A1-203ENST00000394573 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 MSX2P35548 267 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 FKBP3Q00688 224 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 UBE2SQ16763 222 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 DNAL1Q4LDG9 190 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 BTLAQ7Z6A9 289 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 DCLK2Q8N568 766 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 SNF8Q96H20 258 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 CCDC138Q96M89 665 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 TP63Q9H3D4 680 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 QPCTLQ9NXS2 382 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 C1orf232A0A0U1RR37 186 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 CAPN14A8MX76 684 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 H3BNX3 289 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF23P17027 643 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 IST1P53990 364 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 CLUL1Q15846 466 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 CYP4V2Q6ZWL3 525 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 TAS2R42Q7RTR8 314 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 MMAAQ8IVH4 418 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 ELMOD1Q8N336 334 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 RILPQ96NA2 401 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 SAYSD1Q9NPB0 183 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
SLC28A1-203ENST00000394573 CROCCQ5TZA2 2017 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 A0A0A6YYK5 440 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 AP3B1O00203 1094 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CCRL2O00421 344 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 GIPC1O14908 333 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 TCEA3O75764 348 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 PROCP04070 461 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 KRT10P13645 584 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 P4HA1P13674 534 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 ATF2P15336 505 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 XIAPP98170 497 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 NRF1Q16656 503 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 PPP6R3Q5H9R7 873 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CEP78Q5JTW2 689 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 SLC13A5Q86YT5 568 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 TRIM59Q8IWR1 403 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 ATP11BQ9Y2G3 1177 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 PARP4Q9UKK3 1724 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 PCM1Q15154 2024 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 POTECB2RU33 542 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 BANF1O75531 89 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 PTPN2P17706 415 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 COMTP21964 271 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 HSF5Q4G112 596 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 SGO2Q562F6 1265 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 OGFRL1Q5TC84 451 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 GPR180Q86V85 440 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
SLC28A1-203ENST00000394573 UBL4BQ8N7F7 174 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms