RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 KPNB1Q14974 876 aaKnown RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 CCDC14Q49A88 953 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 TXNRD3NBQ6F5E7 133 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 ZNF354CQ86Y25 554 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 ASAP3Q8TDY4 903 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 RNF34Q969K3 372 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 E2F7Q96AV8 911 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 TXLNGYQ9BZA5 131 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 MYOZ2Q9NPC6 264 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 POLIQ9UNA4 740 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 MTO1Q9Y2Z2 717 aaKnown RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 EDF1O60869 148 aaKnown RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 SNRPAP09012 282 aaKnown RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 OSBPP22059 807 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 SURF1Q15526 300 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 NBPF12Q5TAG4 269 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 NPNTQ6UXI9 565 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 MTBPQ96DY7 904 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 SCYL1Q96KG9 808 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 SLC38A10Q9HBR0 1119 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 NDE1Q9NXR1 346 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 RPL22P35268 128 aaKnown RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 PTDSS1P48651 473 aaKnown RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 RASA2Q15283 850 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ZCCHC23Q6ZST2 131 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 RAPH1Q70E73 1250 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 VSIG10LQ86VR7 867 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 PAF1Q8N7H5 531 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ZNF280CQ8ND82 737 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ZNF516Q92618 1163 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 YDJCA8MPS7 323 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 DHX15O43143 795 aaKnown RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 SUPT20HL2P0C7V6 817 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ATXN3P54252 364 aaPredicted RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 CNTN2Q02246 1040 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 STX3Q13277 289 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 RIPK1Q13546 671 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 SUPT20HL1Q3ZLR7 823 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 RSPH3Q86UC2 560 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ALLCQ8N6M5 410 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 NLRP7Q8WX94 980 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 CD101Q93033 1021 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 AGAP3Q96P47 875 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 VCX3BQ9H321 246 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 FAM237BA0A1B0GVD1 139 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 VWA5AO00534 786 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 MAFGO15525 162 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 MTA2O94776 668 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 ITGB3P05106 788 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 UNGP13051 313 aaPredicted RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 VHLP40337 213 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 RABGAP1LQ5R372 815 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 WLSQ5T9L3 541 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 C12orf50Q8NA57 414 aaPredicted RBP16.85■□□□□ 0.29
PCDH1-203ENST00000394536 WWP1Q9H0M0 922 aa16.85■□□□□ 0.29
PCDH1-203ENST00000394536 FCHO1O14526 889 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 AQP5P55064 265 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 CXCL9Q07325 125 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 MMRN1Q13201 1228 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 RFWD2Q8NHY2 731 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 VCPIP1Q96JH7 1222 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 APOBEC3GQ9HC16 384 aaKnown RBP16.84■□□□□ 0.29
PCDH1-203ENST00000394536 USP18Q9UMW8 372 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 MYH1P12882 1939 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 HSD17B4P51659 736 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 GAD2Q05329 585 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 ANKRD22Q5VYY1 191 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 UNC45BQ8IWX7 931 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 TEKT4Q8WW24 435 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 ARL4AP40617 200 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 NAMPTP43490 491 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 MON1BQ7L1V2 547 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 NIPA1Q7RTP0 329 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 TEX9Q8N6V9 391 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 CYP39A1Q9NYL5 469 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 ADGRA3Q8IWK6 1321 aa16.84■□□□□ 0.29
PCDH1-203ENST00000394536 KRT36O76013 467 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 STAMBPO95630 424 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 TYK2P29597 1187 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 SERPINB4P48594 390 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 EFNA5P52803 228 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 HEATR6Q6AI08 1181 aaKnown RBP16.83■□□□□ 0.29
PCDH1-203ENST00000394536 TRAPPC12Q8WVT3 735 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 RSAD1Q9HA92 442 aa16.83■□□□□ 0.29
PCDH1-203ENST00000394536 PEX10O60683 326 aa16.83■□□□□ 0.28
PCDH1-203ENST00000394536 MIPP30301 263 aa16.83■□□□□ 0.28
PCDH1-203ENST00000394536 TCF7P36402 384 aaPredicted RBP16.83■□□□□ 0.28
PCDH1-203ENST00000394536 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.28
PCDH1-203ENST00000394536 SLC30A9Q6PML9 568 aa16.83■□□□□ 0.28
PCDH1-203ENST00000394536 CEP120Q8N960 986 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms