RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PLGP00747 810 aaPredicted RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ID2Q02363 134 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 TCF15Q12870 199 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 IL10RAQ13651 578 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 SEC23BQ15437 767 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 TBC1D25Q3MII6 688 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 AWAT1Q58HT5 328 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 RNASE12Q5GAN4 147 aaKnown RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZNF324BQ6AW86 544 aaPredicted RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 PPP1R32Q7Z5V6 425 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ANKRD13BQ86YJ7 626 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 HOMER1Q86YM7 354 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ADAMTS18Q8TE60 1221 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 PNISRQ8TF01 805 aaKnown RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 XAGE5Q8WWM1 108 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ASB5Q8WWX0 329 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ATG4AQ8WYN0 398 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 DDX17Q92841 729 aaKnown RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 MFSD3Q96ES6 412 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZFYVE19Q96K21 471 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 TTC1Q99614 292 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 BRD9Q9H8M2 597 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 MRPL44Q9H9J2 332 aaKnown RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 GPR35Q9HC97 309 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZNF277Q9NRM2 450 aaPredicted RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 PI4KBQ9UBF8 816 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 MCM8Q9UJA3 840 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 CCNL1Q9UK58 526 aaPredicted RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 GPR45Q9Y5Y3 372 aa2.01□□□□□ -2.09
RNU6-239P-201ENST00000390990 TNFRSF13BO14836 293 aaPredicted RBP2□□□□□ -2.09
RNU6-239P-201ENST00000390990 PDE8AO60658 829 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CHEK2O96017 543 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CTSAP10619 480 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 AGXTP21549 392 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 PHKA1P46020 1223 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CFHR1Q03591 330 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 RAB39AQ14964 217 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CAPRIN2Q6IMN6 1127 aaKnown RBP2□□□□□ -2.09
RNU6-239P-201ENST00000390990 GADL1Q6ZQY3 521 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 BCDIN3DQ7Z5W3 292 aaKnown RBP2□□□□□ -2.09
RNU6-239P-201ENST00000390990 STRA8Q7Z7C7 330 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 MMP21Q8N119 569 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CLPTM1LQ96KA5 538 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 MEIS3Q99687 375 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 TMEM204Q9BSN7 226 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 GLOD4Q9HC38 313 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 FANCLQ9NW38 375 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 CALCOCO1Q9P1Z2 691 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 GABRQQ9UN88 632 aa2□□□□□ -2.09
RNU6-239P-201ENST00000390990 NT5C1B-RDH14C9J2C7 533 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 DCLK1O15075 740 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 ERC2O15083 957 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 SGTAO43765 313 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 CAMTA2O94983 1202 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 MYCLP1P12525 358 aaPredicted RBP1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 TPTEP56180 551 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 STRN3Q13033 797 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 SNAPC2Q13487 334 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 MTX1Q13505 466 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 TMTC4Q5T4D3 741 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 SFRP4Q6FHJ7 346 aaPredicted RBP1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 MIGA2Q7L4E1 593 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 USP37Q86T82 979 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 C8orf37Q96NL8 207 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 FYTTD1Q96QD9 318 aaKnown RBP1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 VRK1Q99986 396 aaPredicted RBP1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 RLIMQ9NVW2 624 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 MAPRE3Q9UPY8 281 aa1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 APOBEC2Q9Y235 224 aaKnown RBP1.99□□□□□ -2.09
RNU6-239P-201ENST00000390990 IGLV5-39A0A0G2JS06 123 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 AP4M1O00189 453 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 GCATO75600 419 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 CGAP01215 116 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 RARBP10826 455 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 MALP21145 153 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 EDNRBP24530 442 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 CYP2C19P33261 490 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 CYP1B1Q16678 543 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 C3orf36Q3SXR2 165 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 KHDC1Q4VXA5 237 aaKnown RBP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 ARHGAP40Q5TG30 622 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 HIST2H2BCQ6DN03 193 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 MTHFD1LQ6UB35 978 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 DDX46Q7L014 1031 aaKnown RBP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 LIX1LQ8IVB5 337 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 NUDCD2Q8WVJ2 157 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 APPBP2Q92624 585 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 KAT5Q92993 513 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 HDAC10Q969S8 669 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 AHCYL2Q96HN2 611 aaKnown RBP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 CCDC17Q96LX7 622 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 SLC46A1Q96NT5 459 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 C1orf43Q9BWL3 253 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 ZSWIM4Q9H7M6 989 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 SEMA4BQ9NPR2 832 aaPredicted RBP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 SLAMF7Q9NQ25 335 aa1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 SIDT1Q9NXL6 827 aaKnown RBP1.98□□□□□ -2.09
RNU6-239P-201ENST00000390990 TFCP2L1Q9NZI6 479 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms