RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 DUSP16Q9BY84 665 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 ATP8B3O60423 1300 aa16.4■□□□□ 0.22
PDGFB-202ENST00000381551 LRRC53A6NM62 1247 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 BEST1O76090 585 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 HNRNPA1P09651 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 ATF6P18850 670 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 HOXA9P31269 272 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 ALDH1A3P47895 512 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 GPR15P49685 360 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 ZBED6P86452 979 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 TWF1Q12792 350 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 TBX2Q13207 712 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 STILQ15468 1287 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 SKIV2LQ15477 1246 aaKnown RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 EP400NLQ6ZTU2 488 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 FEZF2Q8TBJ5 459 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 SMOQ99835 787 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 PRKD2Q9BZL6 878 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 S1PR5Q9H228 398 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 SFXN1Q9H9B4 322 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 KRT82Q9NSB4 513 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 LUC7L2Q9Y383 392 aaKnown RBP16.39■□□□□ 0.21
PDGFB-202ENST00000381551 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
PDGFB-202ENST00000381551 F8VP50 259 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 THAP12O43422 761 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 MED7O43513 233 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 AP1G2O75843 785 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 ADCY5O95622 1261 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 LRG1P02750 347 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 POU2F2P09086 479 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 FAM200BP0CF97 657 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 FERP16591 822 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 CASP14P31944 242 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 EPHB3P54753 998 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 PLD1Q13393 1074 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 GOLGA7BQ2TAP0 167 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 PKDCCQ504Y2 493 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 TMC5Q6UXY8 1006 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 TMC6Q7Z403 805 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 ZMIZ2Q8NF64 920 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 ZNF397Q8NF99 534 aaPredicted RBP16.38■□□□□ 0.21
PDGFB-202ENST00000381551 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
PDGFB-202ENST00000381551 HLA-CQ95604 372 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 SPATA17Q96L03 361 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 CEP295NLQ96MC4 621 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
PDGFB-202ENST00000381551 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
PDGFB-202ENST00000381551 PTPRDP23468 1912 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 EYSQ5T1H1 3165 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 TRIM66O15016 1216 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 CCL16O15467 120 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 MICAL2O94851 1124 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 CFHP08603 1231 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 NPR3P17342 541 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 MAP3K7CLP57077 242 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 ARID5AQ03989 594 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 TRIM14Q14142 442 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 RARS2Q5T160 578 aaKnown RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 CYP26C1Q6V0L0 522 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 DNAJB7Q7Z6W7 309 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 GPR149Q86SP6 731 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 NOP9Q86U38 636 aaKnown RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 GPR152Q8TDT2 470 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 EPS8L1Q8TE68 723 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 GIPC2Q8TF65 315 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 ZNF512Q96ME7 567 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 ADAM7Q9H2U9 754 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 UBE2ZQ9H832 354 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 DMAP1Q9NPF5 467 aaPredicted RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 HESX1Q9UBX0 185 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 NOCTQ9UK39 431 aaKnown RBP16.37■□□□□ 0.21
PDGFB-202ENST00000381551 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 ASB3Q9Y575 518 aa16.37■□□□□ 0.21
PDGFB-202ENST00000381551 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 PTPN2P17706 415 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 KCNA5P22460 613 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 ANXA13P27216 316 aa16.36■□□□□ 0.21
PDGFB-202ENST00000381551 KRT9P35527 623 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms