RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 EPS8L3Q8TE67 593 aaKnown RBP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 ZC4H2Q9NQZ6 224 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 HACL1Q9UJ83 578 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 CHD1O14646 1710 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 POLR1AO95602 1720 aaPredicted RBP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 hCG_2014768A0A024R1R8 64 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 EVPLLA8MZ36 301 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 PMPCBO75439 489 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 DGKIO75912 1065 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 CETPP11597 493 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 MYBPC2Q14324 1141 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 DENND1BQ6P3S1 775 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 SNX31Q8N9S9 440 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 FAM162AQ96A26 154 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 PACSIN1Q9BY11 444 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 WDCPQ9H6R7 721 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 HNRNPCP07910 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 PTPN7P35236 360 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 VHLP40337 213 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 ZRANB3Q5FWF4 1079 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 C10orf120Q5SQS8 335 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL2A1-202ENST00000380518 PLD3Q8IV08 490 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 FBXO36Q8NEA4 188 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 MTMR12Q9C0I1 747 aa16.66■□□□□ 0.26
COL2A1-202ENST00000380518 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 CCL15-CCL14A0A0B4J2E2 113 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 STX7O15400 261 aaKnown RBP16.65■□□□□ 0.26
COL2A1-202ENST00000380518 F9P00740 461 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ETFBP38117 255 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 POU4F1Q01851 419 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 CCL15Q16663 113 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 GNASQ5JWF2 1037 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 WLSQ5T9L3 541 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 AGAP9Q5VTM2 703 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 PPP4R4Q6NUP7 873 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 LAYNQ6UX15 382 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 INPP5DQ92835 1189 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 SGF29Q96ES7 293 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 SH3GL3Q99963 347 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ARP10275 920 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 SEZ6Q53EL9 994 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 NLRP9Q7RTR0 991 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 FBXO25Q8TCJ0 367 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 DDX28Q9NUL7 540 aaKnown RBP16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 CPS1P31327 1500 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 F8VZ95 297 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 CPT1AP50416 773 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 HERVK_113P62684 666 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 OVGP1Q12889 678 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ITIH4Q14624 930 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 MRNIPQ6NTE8 343 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 SLC30A9Q6PML9 568 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 MPZL3Q6UWV2 235 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ATP6V0D2Q8N8Y2 350 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 TNIP2Q8NFZ5 429 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 CGRRF1Q99675 332 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 DCDC2Q9UHG0 476 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 SDR42E2A6NKP2 422 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 TIMM44O43615 452 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ACO1P21399 889 aaKnown RBP16.65■□□□□ 0.26
COL2A1-202ENST00000380518 RRM1P23921 792 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 WASHC5Q12768 1159 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 PRPF18Q99633 342 aaKnown RBP16.65■□□□□ 0.26
COL2A1-202ENST00000380518 TMBIM4Q9HC24 238 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 HEY2Q9UBP5 337 aa16.65■□□□□ 0.26
COL2A1-202ENST00000380518 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.65■□□□□ 0.26
COL2A1-202ENST00000380518 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 ZBTB39O15060 712 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 PROSCO94903 275 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 S100A5P33763 92 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 PAWRQ96IZ0 340 aaKnown RBP16.64■□□□□ 0.26
COL2A1-202ENST00000380518 MAGEB18Q96M61 343 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 MTIF3Q9H2K0 278 aaKnown RBP16.64■□□□□ 0.26
COL2A1-202ENST00000380518 NOD2Q9HC29 1040 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 SPON1Q9HCB6 807 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.26
COL2A1-202ENST00000380518 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 AKAP3O75969 853 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 ODC1P11926 461 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 OTUD4Q01804 1114 aaKnown RBP16.64■□□□□ 0.25
COL2A1-202ENST00000380518 Q4G0T1 1027 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 EXD1Q8NHP7 514 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 FAR2Q96K12 515 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 CNDP1Q96KN2 507 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 CCT7Q99832 543 aa16.64■□□□□ 0.25
COL2A1-202ENST00000380518 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms