RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ZNF263O14978 683 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 PRPF4O43172 522 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ALADP13716 330 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 GSTA3Q16772 222 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 SPDYE7PQ495Y7 208 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 EXD1Q8NHP7 514 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 MTERF3Q96E29 417 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 AFF4Q9UHB7 1163 aaKnown RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 VPS37AQ8NEZ2 397 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 TADA1Q96BN2 335 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ARHGAP20Q9P2F6 1191 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 EIF3LQ9Y262 564 aaKnown RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ABLIM1O14639 778 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 NBNO60934 754 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 SOAT2O75908 522 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 GYS1P13807 737 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 TFE3P19532 575 aaPredicted RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 PRKAA2P54646 552 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ATP1A4Q13733 1029 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 TRIM25Q14258 630 aaKnown RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 PKN3Q6P5Z2 889 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 CENPLQ8N0S6 344 aaPredicted RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ZNF669Q96BR6 464 aaPredicted RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 NSUN4Q96CB9 384 aaKnown RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 PAIP1Q9H074 479 aaKnown RBP17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 IMPAD1Q9NX62 359 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 GJB7Q6PEY0 223 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 UNC45BQ8IWX7 931 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 HES6Q96HZ4 224 aa17.72■□□□□ 0.43
COL4A3BP-203ENST00000380494 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 PECAM1P16284 738 aaPredicted RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 TTKP33981 857 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 XKR3Q5GH77 459 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 RNF43Q68DV7 783 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 PACSIN1Q9BY11 444 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 RAD21L1Q9H4I0 556 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 VPS9D1Q9Y2B5 631 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 STARD13Q9Y3M8 1113 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 EPHB2P29323 1055 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 CDK16Q00536 496 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 PDK2Q15119 407 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 ARMCX6Q7L4S7 300 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 DEFB107AQ8IZN7 70 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 TATDN2Q93075 761 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 DDX50Q9BQ39 737 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MTMR4Q9NYA4 1195 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MCM8Q9UJA3 840 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 ARIH2O95376 493 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 RAG1P15918 1043 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MUTP22033 750 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 GSTT1P30711 240 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 KRT20P35900 424 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MTFR1Q15390 333 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 TTMPQ5BVD1 217 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 HDDC2Q7Z4H3 204 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 WDR60Q8WVS4 1066 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 C1orf50Q9BV19 199 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 NIF3L1Q9GZT8 377 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 UBAP1Q9NZ09 502 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 KLHL41O60662 606 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 WFS1O76024 890 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SARSP49591 514 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SFSWAPQ12872 951 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 LAMC2Q13753 1193 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 DGUOKQ16854 277 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SCN4BQ8IWT1 228 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 FAM9CQ8IZT9 166 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 MREGQ8N565 214 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 OSCP1Q8WVF1 389 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 DLG3Q92796 817 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SHCBP1LQ9BZQ2 653 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 FAM49AQ9H0Q0 323 aaPredicted RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 METTL5Q9NRN9 209 aaKnown RBP17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 VTI1BQ9UEU0 232 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SHOC2Q9UQ13 582 aa17.71■□□□□ 0.43
COL4A3BP-203ENST00000380494 SDR42E2A6NKP2 422 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 FASP25445 335 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 Q3C1V9 767 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 KCNV1Q6PIU1 500 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 TSHZ1Q6ZSZ6 1077 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 NET1Q7Z628 596 aaPredicted RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 APOPT1Q96IL0 206 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 RMND5AQ9H871 391 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 A0A087WXM4 84 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 FCHO1O14526 889 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 RGS4P49798 205 aa17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 PKN2Q16513 984 aaKnown RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 ZCCHC7Q8N3Z6 543 aaKnown RBP17.7■□□□□ 0.42
COL4A3BP-203ENST00000380494 IL25Q9H293 177 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms