RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZFYVE27Q5T4F4 411 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CYP4A22Q5TCH4 519 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 TLK2Q86UE8 772 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 UNC93AQ86WB7 457 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 OR2W6PQ8NHA6 318 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 DIS3LQ8TF46 1054 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 SOCS4Q8WXH5 440 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 ATG4AQ8WYN0 398 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 TLCD1Q96CP7 247 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 TWNKQ96RR1 684 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 HEMGNQ9BXL5 484 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 CENPHQ9H3R5 247 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 ASNSD1Q9NWL6 643 aa11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 R3HDM2Q9Y2K5 976 aaKnown RBP11.03□□□□□ -0.64
POLR2J3-201ENST00000379340 GOLGA8SH3BPF8 625 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ADCY6O43306 1168 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 AGTP01019 485 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 CD4P01730 458 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ZNF865P0CJ78 1059 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 DESP17661 470 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 HOXA11P31270 313 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 RFC1P35251 1148 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 PCK1P35558 622 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ADCY8P40145 1251 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 RGS2P41220 211 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 CDKN2BP42772 138 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 NDST1P52848 882 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ITGA8P53708 1063 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 KIZQ2M2Z5 673 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 DAB2IPQ5VWQ8 1189 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 RELL1Q8IUW5 271 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 NME8Q8N427 588 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 USP6NLQ92738 828 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 KAT2BQ92831 832 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 CPXM1Q96SM3 734 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 GDF15Q99988 308 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 FAM49AQ9H0Q0 323 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 METTL5Q9NRN9 209 aaKnown RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 CNTN3Q9P232 1028 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 CYTH4Q9UIA0 394 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ANAPC5Q9UJX4 755 aa11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 ZMYND8Q9ULU4 1186 aaPredicted RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 UBQLN1Q9UMX0 589 aaKnown RBP11.02□□□□□ -0.65
POLR2J3-201ENST00000379340 LRRD1A4D1F6 860 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 LRCH4O75427 683 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 RNF8O76064 485 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ERBB2P04626 1255 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ITGAVP06756 1048 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 GNAT1P11488 350 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 KLRC2P26717 231 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ATP5DP30049 168 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 RDXP35241 583 aaKnown RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 PNPLA4P41247 253 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ATP1A2P50993 1020 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ADAM17P78536 824 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 SLC25A11Q02978 314 aaKnown RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 SLC29A2Q14542 456 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 TAZQ16635 292 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ALLCQ8N6M5 410 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 ZNF560Q96MR9 790 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 APBA2Q99767 749 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 SEMA4AQ9H3S1 761 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 SNTG2Q9NY99 539 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 BCCIPQ9P287 314 aaKnown RBP eCLIP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 HMGXB4Q9UGU5 601 aa11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 NOVA2Q9UNW9 492 aaKnown RBP11.01□□□□□ -0.65
POLR2J3-201ENST00000379340 PI4K2BG5E9Z4 385 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 DNALI1O14645 258 aaPredicted RBP11□□□□□ -0.65
POLR2J3-201ENST00000379340 RGS16O15492 202 aaPredicted RBP11□□□□□ -0.65
POLR2J3-201ENST00000379340 KPNA6O60684 536 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 CYP3A5P20815 502 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 GPD1P21695 349 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 LSP1P33241 339 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 ZNF143P52747 638 aaPredicted RBP11□□□□□ -0.65
POLR2J3-201ENST00000379340 IZUMO3Q5VZ72 239 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 ARHGAP17Q68EM7 881 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 MFSD5Q6N075 450 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 HIBCHQ6NVY1 386 aaPredicted RBP11□□□□□ -0.65
POLR2J3-201ENST00000379340 ALKAL1Q6UXT8 129 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 BBS12Q6ZW61 710 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 SPATS2Q86XZ4 545 aaKnown RBP11□□□□□ -0.65
POLR2J3-201ENST00000379340 ZDHHC17Q8IUH5 632 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 JOSD2Q8TAC2 188 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 BCAS4Q8TDM0 211 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 STK32AQ8WU08 396 aa11□□□□□ -0.65
POLR2J3-201ENST00000379340 PAWRQ96IZ0 340 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms