RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SLCO1B7G3V0H7 640 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 DNM1LO00429 736 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 C2CD2LO14523 706 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 DNAJC6O75061 913 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SLITRK3O94933 977 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 CLPTM1O96005 669 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 HADHBP55084 474 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 PDPK2PQ6A1A2 396 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 OTOP1Q7RTM1 612 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 FAR2Q96K12 515 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 CHST7Q9NS84 486 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ICAM1P05362 532 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 XIAPP98170 497 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 LBRQ14739 615 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ZFP1Q6P2D0 407 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 C15orf52Q6ZUT6 534 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 C1orf186Q6ZWK4 172 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 FAM71AQ8IYT1 594 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 PCYOX1LQ8NBM8 494 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 RNF169Q8NCN4 708 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TSPAN17Q96FV3 270 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 CATSPER2Q96P56 530 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 NEUROG2Q9H2A3 272 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 THAP1Q9NVV9 213 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TAS2R14Q9NYV8 317 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 LGALS13Q9UHV8 139 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ZNF711Q9Y462 761 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TRDMT1O14717 391 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TMCC1O94876 653 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ABCE1P61221 599 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 YWHAHQ04917 246 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 MROH9Q5TGP6 573 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 KCNV1Q6PIU1 500 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 LRRC43Q8N309 656 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TAS1R2Q8TE23 839 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 GDPD5Q8WTR4 605 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ZMAT2Q96NC0 199 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TMEM121Q9BTD3 319 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 FSD1LQ9BXM9 530 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SLC12A6Q9UHW9 1150 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ANGPTL3Q9Y5C1 460 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 COMMD3-BMI1R4GMX3 469 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 OATP04181 439 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 PSMC3P17980 439 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 NPTX2P47972 431 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 CASP5P51878 434 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SESN2P58004 480 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 PDK1Q15118 436 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SMTNL2Q2TAL5 461 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 LRRC38Q5VT99 294 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 PRPF31Q8WWY3 499 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TMA16Q96EY4 203 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 NAT9Q9BTE0 207 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TOPORSQ9NS56 1045 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 DNAJC16Q9Y2G8 782 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 AP4S1Q9Y587 144 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 MAGEB2O15479 319 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 NUDT2P50583 147 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 FASTKD1Q53R41 847 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 CYP4A22Q5TCH4 519 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ALLCQ8N6M5 410 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 SPIRE2Q8WWL2 714 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TRIM62Q9BVG3 475 aa9.12□□□□□ -0.95
PCDH9-202ENST00000377865 ILKAPQ9H0C8 392 aaPredicted RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 WARS2Q9UGM6 360 aaKnown RBP9.12□□□□□ -0.95
PCDH9-202ENST00000377865 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 GJB6O95452 261 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 SHMT1P34896 483 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 CHKAP35790 457 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 PRKAA2P54646 552 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 BLMHQ13867 455 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 ACCSLQ4AC99 568 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 ACBD5Q5T8D3 534 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 AADACL2Q6P093 401 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 RIN3Q8TB24 985 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 FAM210AQ96ND0 272 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 STN1Q9H668 368 aaKnown RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 AGO4Q9HCK5 861 aaKnown RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 RGPD8O14715 1765 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 FAM86B1E9PN63 330 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 EDF1O60869 148 aaKnown RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 FAM86B2P0C5J1 330 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 FAM58BPP0C7Q3 252 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 NAMPTP43490 491 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 ACADSBP45954 432 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 ARHGDIAP52565 204 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 RBP5P82980 135 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-202ENST00000377865 PID1Q7Z2X4 250 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 GPR141Q7Z602 305 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 B4GALNT2Q8NHY0 566 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 TASP1Q9H6P5 420 aa9.11□□□□□ -0.95
PCDH9-202ENST00000377865 DMAP1Q9NPF5 467 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms