RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ARHGDIAP52565 204 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 CAV1Q03135 178 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 METTL7BQ6UX53 244 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 POP1Q99575 1024 aaKnown RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 TINF2Q9BSI4 451 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 VIPAS39Q9H9C1 493 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 CD248Q9HCU0 757 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 BFARQ9NZS9 450 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 UXTQ9UBK9 157 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 L3MBTL1Q9Y468 752 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 NFAT5O94916 1531 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 NCAM1P13591 858 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 TM4SF1P30408 202 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 PGM1P36871 562 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 TAP1Q03518 808 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 PHACTR4Q8IZ21 702 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 SUN2Q9UH99 717 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 DYRK3O43781 588 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 WEE2P0C1S8 567 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ORC1Q13415 861 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 NCAPHQ15003 741 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 RD3Q7Z3Z2 195 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 RBM23Q86U06 439 aaKnown RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 C1orf54Q8WWF1 131 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 MRPS23Q9Y3D9 190 aaKnown RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ARHGEF9O43307 516 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ERVK-10P10266 1014 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 HOXA10P31260 410 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 KCNA1Q09470 495 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 LRRC36Q1X8D7 754 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 DSG4Q86SJ6 1040 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 SEC16BQ96JE7 1060 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 RPRD1AQ96P16 312 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 VPS11Q9H270 941 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 TLE6Q9H808 572 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ALG13Q9NP73 1137 aaKnown RBP11.26□□□□□ -0.61
HIF3A-205ENST00000377670 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 ARL2BPQ9Y2Y0 163 aa11.26□□□□□ -0.61
HIF3A-205ENST00000377670 KRT38O76015 456 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 MYBL1P10243 752 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SCP2P22307 547 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 ETFBP38117 255 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CDH6P55285 790 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 KLC1Q07866 573 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 LAMB3Q13751 1172 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 FLOT2Q14254 428 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 AIPL1Q9NZN9 384 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 KCND2Q9NZV8 630 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 AP1G2O75843 785 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CHRNA3P32297 505 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 MTM1Q13496 603 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 LY6KQ17RY6 165 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 FOXR1Q6PIV2 292 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 ZBED8Q8IZ13 594 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 NLGN2Q8NFZ4 835 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 GRAMD1AQ96CP6 724 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CGRRF1Q99675 332 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 DDX28Q9NUL7 540 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 DUSP10Q9Y6W6 482 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 EEF2KO00418 725 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 GRAP2O75791 330 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SEC24DO94855 1032 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 ELNP15502 786 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CUL3Q13618 768 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 RARS2Q5T160 578 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PALB2Q86YC2 1186 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 TEX9Q8N6V9 391 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PPHLN1Q8NEY8 458 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 USP33Q8TEY7 942 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 USP6NLQ92738 828 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 USP13Q92995 863 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CDK5RAP1Q96SZ6 601 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SLC13A1Q9BZW2 595 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 C6orf203Q9P0P8 240 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 TRIM33Q9UPN9 1127 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 APOL1O14791 398 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 GOLGA7BQ2TAP0 167 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 SNF8Q96H20 258 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 TEX12Q9BXU0 123 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 APEX2Q9UBZ4 518 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PCDHGB4Q9UN71 923 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms