RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 DMAP1Q9NPF5 467 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 HOMER3Q9NSC5 361 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PLAGL2Q9UPG8 496 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GIT1Q9Y2X7 761 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 KCNN4O15554 427 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 STAMBPO95630 424 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 BMP6P22004 513 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 DHX9Q08211 1270 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 BST2Q10589 180 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 NR1H3Q13133 447 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PIGHQ14442 188 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ARFGAP2Q8N6H7 521 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PYROXD1Q8WU10 500 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 GAS2L1Q99501 681 aaPredicted RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 PACSIN1Q9BY11 444 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 R3HDMLQ9H3Y0 253 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ZCCHC17Q9NP64 241 aaKnown RBP8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 UVRAGQ9P2Y5 699 aa8.87□□□□□ -0.99
CRNKL1-202ENST00000377340 ASTN1O14525 1302 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 A0A0B4J269 797 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 MYADML2A6NDP7 307 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ADCY6O43306 1168 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 TSPAN1O60635 241 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 PPM1AP35813 382 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 IRX4P78413 519 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 PTK7Q13308 1070 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ACAD10Q6JQN1 1059 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 SH3RF1Q7Z6J0 888 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 FAM172AQ8WUF8 416 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 EXT2Q93063 718 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP6V1E2Q96A05 226 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 B3GALT6Q96L58 329 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ULBP1Q9BZM6 244 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 DUSP10Q9Y6W6 482 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 F5H5T6 163 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 DHX15O43143 795 aaKnown RBP8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 APRTP07741 180 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 CKBP12277 381 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 HDCP19113 662 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 PPP2R2DQ66LE6 453 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 DENND5BQ6ZUT9 1274 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 RNF10Q8N5U6 811 aaKnown RBP8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 SMARCD1Q96GM5 515 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 TTPALQ9BTX7 342 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 SYNDIG1Q9H7V2 258 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 TLR8Q9NR97 1041 aaKnown RBP8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 CHST12Q9NRB3 414 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 TELO2Q9Y4R8 837 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 PKD1L3Q7Z443 1732 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 GRM5P41594 1212 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 CLCNKBP51801 687 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 KPNA1P52294 538 aaPredicted RBP8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 PRAMEP78395 509 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ROR1Q01973 937 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 GRIK3Q13003 919 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 TAS2R42Q7RTR8 314 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 CCDC13Q8IYE1 715 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ARHGAP18Q8N392 663 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP6V0D2Q8N8Y2 350 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 MS4A14Q96JA4 679 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 MINDY3Q9H8M7 445 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 SMARCAL1Q9NZC9 954 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
CRNKL1-202ENST00000377340 CBX4O00257 560 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP5DP30049 168 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 KCNJ1P48048 391 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 YWHAZP63104 245 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 PKN2Q16513 984 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 DCLRE1AQ6PJP8 1040 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ANKS3Q6ZW76 656 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 SPATA18Q8TC71 538 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 AUTS2Q8WXX7 1259 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ELOVL4Q9GZR5 314 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 WNT8AQ9H1J5 351 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 RNF39Q9H2S5 420 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 COL1A2P08123 1366 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ASS1P00966 412 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP1A1P05023 1023 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 RBP3P10745 1247 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ARL2P36404 184 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 NT5DC1Q5TFE4 455 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 KCTD16Q68DU8 428 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF677Q86XU0 584 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 TTC8Q8TAM2 541 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 OSBPL9Q96SU4 736 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ADAM33Q9BZ11 813 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 MFSD1Q9H3U5 465 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 FBXO44Q9H4M3 255 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 BFARQ9NZS9 450 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ITIH6Q6UXX5 1313 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 UBA6A0AVT1 1052 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 E5RJQ4 531 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 PPP1R12AO14974 1030 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ZNF185O15231 689 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 GLUD1P00367 558 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 CST3P01034 146 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 TM4SF4P48230 202 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 NCAPHQ15003 741 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 TAPT1Q6NXT6 567 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms