RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 NME7Q9Y5B8 376 aa19.04■□□□□ 0.64
IRF3-202ENST00000377135 R4GN57 208 aa19.04■□□□□ 0.64
IRF3-202ENST00000377135 RIF1Q5UIP0 2472 aaKnown RBP19.03■□□□□ 0.64
IRF3-202ENST00000377135 IKBKBO14920 756 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 CDH8P55286 799 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 PLCB2Q00722 1185 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 CSTF1Q05048 431 aaKnown RBP19.03■□□□□ 0.64
IRF3-202ENST00000377135 SGSM1Q2NKQ1 1148 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 ZNF699Q32M78 642 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 ZNF667Q5HYK9 610 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 ZNF687Q8N1G0 1237 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 GUF1Q8N442 669 aaKnown RBP19.03■□□□□ 0.64
IRF3-202ENST00000377135 USP13Q92995 863 aaPredicted RBP19.03■□□□□ 0.64
IRF3-202ENST00000377135 CYP2S1Q96SQ9 504 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 VRTNQ9H8Y1 702 aa19.03■□□□□ 0.64
IRF3-202ENST00000377135 USP34Q70CQ2 3546 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 PRR23AA6NEV1 266 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 VNN1O95497 513 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 RPL13P26373 211 aaKnown RBP19.02■□□□□ 0.64
IRF3-202ENST00000377135 ANXA13P27216 316 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 SOX9P48436 509 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 ADAM9Q13443 819 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 C1orf228Q6PIY5 440 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 SV2AQ7L0J3 742 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 ELMO3Q96BJ8 720 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 CEP295NLQ96MC4 621 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 SEMA4AQ9H3S1 761 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 DPEP3Q9H4B8 488 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 TRPC7Q9HCX4 862 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 FBXO4Q9UKT5 387 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 CCL26Q9Y258 94 aa19.02■□□□□ 0.64
IRF3-202ENST00000377135 NR2F2P24468 414 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 VAMP7P51809 220 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 TNK2Q07912 1038 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 MTAPQ13126 283 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 ZACNQ401N2 412 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 CC2D1AQ6P1N0 951 aaPredicted RBP19.01■□□□□ 0.63
IRF3-202ENST00000377135 RALGPS2Q86X27 583 aaPredicted RBP19.01■□□□□ 0.63
IRF3-202ENST00000377135 FMR1NBQ8N0W7 255 aaPredicted RBP19.01■□□□□ 0.63
IRF3-202ENST00000377135 MSANTD3Q96H12 275 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 MYO15AQ9UKN7 3530 aa19.01■□□□□ 0.63
IRF3-202ENST00000377135 SPECC1L-ADORA2AF8WAN1 911 aa19■□□□□ 0.63
IRF3-202ENST00000377135 TRIM66O15016 1216 aa19■□□□□ 0.63
IRF3-202ENST00000377135 MAPK13O15264 365 aa19■□□□□ 0.63
IRF3-202ENST00000377135 AKAP3O75969 853 aa19■□□□□ 0.63
IRF3-202ENST00000377135 USP17L7P0C7H9 530 aa19■□□□□ 0.63
IRF3-202ENST00000377135 CHRNB1P11230 501 aa19■□□□□ 0.63
IRF3-202ENST00000377135 P4HA1P13674 534 aa19■□□□□ 0.63
IRF3-202ENST00000377135 HDCP19113 662 aa19■□□□□ 0.63
IRF3-202ENST00000377135 NFIL3Q16649 462 aa19■□□□□ 0.63
IRF3-202ENST00000377135 ITPRIPL2Q3MIP1 535 aa19■□□□□ 0.63
IRF3-202ENST00000377135 ZNF528Q3MIS6 628 aa19■□□□□ 0.63
IRF3-202ENST00000377135 ZC3H14Q6PJT7 736 aaKnown RBP19■□□□□ 0.63
IRF3-202ENST00000377135 DENND5BQ6ZUT9 1274 aa19■□□□□ 0.63
IRF3-202ENST00000377135 B3GALNT2Q8NCR0 500 aa19■□□□□ 0.63
IRF3-202ENST00000377135 C8orf48Q96LL4 319 aa19■□□□□ 0.63
IRF3-202ENST00000377135 FAM83CQ9BQN1 747 aa19■□□□□ 0.63
IRF3-202ENST00000377135 B3GNT5Q9BYG0 378 aa19■□□□□ 0.63
IRF3-202ENST00000377135 SMYD3Q9H7B4 428 aa19■□□□□ 0.63
IRF3-202ENST00000377135 EHD2Q9NZN4 543 aa19■□□□□ 0.63
IRF3-202ENST00000377135 TRAV19A0A0A6YYK7 116 aa19■□□□□ 0.63
IRF3-202ENST00000377135 F8VP50 259 aa19■□□□□ 0.63
IRF3-202ENST00000377135 CLDN5O00501 218 aa19■□□□□ 0.63
IRF3-202ENST00000377135 TADA3O75528 432 aa19■□□□□ 0.63
IRF3-202ENST00000377135 KRT13P13646 458 aa19■□□□□ 0.63
IRF3-202ENST00000377135 PSMC2P35998 433 aaKnown RBP19■□□□□ 0.63
IRF3-202ENST00000377135 RAP1GAPP47736 663 aa19■□□□□ 0.63
IRF3-202ENST00000377135 PNOCQ13519 176 aa19■□□□□ 0.63
IRF3-202ENST00000377135 ZNF268Q14587 947 aaPredicted RBP19■□□□□ 0.63
IRF3-202ENST00000377135 C1orf220Q5T0J3 134 aa19■□□□□ 0.63
IRF3-202ENST00000377135 MAMSTRQ6ZN01 415 aa19■□□□□ 0.63
IRF3-202ENST00000377135 INTS8Q75QN2 995 aaKnown RBP19■□□□□ 0.63
IRF3-202ENST00000377135 ARL14EPQ8N8R7 260 aaPredicted RBP19■□□□□ 0.63
IRF3-202ENST00000377135 TTC16Q8NEE8 873 aa19■□□□□ 0.63
IRF3-202ENST00000377135 TAF4BQ92750 862 aa19■□□□□ 0.63
IRF3-202ENST00000377135 ELOVL4Q9GZR5 314 aa19■□□□□ 0.63
IRF3-202ENST00000377135 CHRDQ9H2X0 955 aa19■□□□□ 0.63
IRF3-202ENST00000377135 KIF9Q9HAQ2 790 aa19■□□□□ 0.63
IRF3-202ENST00000377135 TRPM5Q9NZQ8 1165 aa19■□□□□ 0.63
IRF3-202ENST00000377135 MIA3Q5JRA6 1907 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 CKMP06732 381 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 CTHP32929 405 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 USP46P62068 366 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 RUNX3Q13761 415 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 SCARA5Q6ZMJ2 495 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 FAM186BQ8IYM0 893 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 SMYD4Q8IYR2 804 aaPredicted RBP18.99■□□□□ 0.63
IRF3-202ENST00000377135 ATRIPQ8WXE1 791 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 TNIP3Q96KP6 325 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 SLC22A12Q96S37 553 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 ZNF518BQ9C0D4 1074 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 SDCBP2Q9H190 292 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 RMND1Q9NWS8 449 aa18.99■□□□□ 0.63
IRF3-202ENST00000377135 VPS13AQ96RL7 3174 aa18.98■□□□□ 0.63
IRF3-202ENST00000377135 C2orf78A6NCI8 922 aa18.98■□□□□ 0.63
IRF3-202ENST00000377135 HLA-DRAP01903 254 aa18.98■□□□□ 0.63
IRF3-202ENST00000377135 LMNAP02545 664 aaKnown RBP18.98■□□□□ 0.63
IRF3-202ENST00000377135 GCLMP48507 274 aa18.98■□□□□ 0.63
IRF3-202ENST00000377135 NOP14P78316 857 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms