RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 WDR87Q6ZQQ6 2873 aa22.5■■□□□ 1.19
VSX1-201ENST00000376707 TRAV19A0A0A6YYK7 116 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 PVALEFA0A1B0GWK0 134 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 CHURC1-FNTBB4DL54 471 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 CST3P01034 146 aaPredicted RBP22.49■■□□□ 1.19
VSX1-201ENST00000376707 USP17L7P0C7H9 530 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 GRIK1P39086 918 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 FNTBP49356 437 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 AMPD2Q01433 879 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 FAM160A1Q05DH4 1040 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 CUL4BQ13620 913 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 PUM1Q14671 1186 aaKnown RBP eCLIP22.49■■□□□ 1.19
VSX1-201ENST00000376707 PDGFRLQ15198 375 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 LPAL2Q16609 132 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 PRR23BQ6ZRT6 265 aa22.49■■□□□ 1.19
VSX1-201ENST00000376707 CGNQ9P2M7 1197 aaKnown RBP22.49■■□□□ 1.19
VSX1-201ENST00000376707 K7ESF4 209 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 ARSAP15289 507 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 BDNFP23560 247 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 ANXA13P27216 316 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 GNL1P36915 607 aaPredicted RBP22.48■■□□□ 1.19
VSX1-201ENST00000376707 TNNC1P63316 161 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 DMWDQ09019 674 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 GRSF1Q12849 480 aaKnown RBP eCLIP22.48■■□□□ 1.19
VSX1-201ENST00000376707 TRPC3Q13507 836 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 MTF1Q14872 753 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 HEATR6Q6AI08 1181 aaKnown RBP22.48■■□□□ 1.19
VSX1-201ENST00000376707 DGLUCYQ7Z3D6 616 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 RIN3Q8TB24 985 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 SPATA17Q96L03 361 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 CYP2S1Q96SQ9 504 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 ZDHHC9Q9Y397 364 aa22.48■■□□□ 1.19
VSX1-201ENST00000376707 OTOL1A6NHN0 477 aaPredicted RBP22.47■■□□□ 1.19
VSX1-201ENST00000376707 EXOC3O60645 756 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 TACC1O75410 805 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 SLFN14P0C7P3 912 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 SIM2Q14190 667 aaPredicted RBP22.47■■□□□ 1.19
VSX1-201ENST00000376707 KCNB1Q14721 858 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 KNOP1Q1ED39 458 aaKnown RBP22.47■■□□□ 1.19
VSX1-201ENST00000376707 WDR72Q3MJ13 1102 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 TMEM196Q5HYL7 178 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 MDH1BQ5I0G3 518 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 LAIR1Q6GTX8 287 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 LONP2Q86WA8 852 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 C12orf56Q8IXR9 622 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 GRAMD1CQ8IYS0 662 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 OR6B3Q8NGW1 331 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 MYCBPAPQ8TBZ2 947 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 PCED1BQ96HM7 432 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 CEP295NLQ96MC4 621 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 SLC22A12Q96S37 553 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 MRPL45Q9BRJ2 306 aaKnown RBP22.47■■□□□ 1.19
VSX1-201ENST00000376707 C2orf42Q9NWW7 574 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 USP18Q9UMW8 372 aa22.47■■□□□ 1.19
VSX1-201ENST00000376707 TRDMT1O14717 391 aaKnown RBP22.46■■□□□ 1.19
VSX1-201ENST00000376707 ACTN4O43707 911 aaKnown RBP22.46■■□□□ 1.19
VSX1-201ENST00000376707 CNR2P34972 360 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 ZNF77Q15935 545 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 RSPO4Q2I0M5 234 aaPredicted RBP22.46■■□□□ 1.19
VSX1-201ENST00000376707 FSTL4Q6MZW2 842 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 DENND5BQ6ZUT9 1274 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 CPA6Q8N4T0 437 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 ARL14EPQ8N8R7 260 aaPredicted RBP22.46■■□□□ 1.19
VSX1-201ENST00000376707 GOLGA5Q8TBA6 731 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 EXOC4Q96A65 974 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 DUS2Q9NX74 493 aaKnown RBP22.46■■□□□ 1.19
VSX1-201ENST00000376707 EHD2Q9NZN4 543 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 SERTAD1Q9UHV2 236 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 FRYLO94915 3013 aa22.46■■□□□ 1.19
VSX1-201ENST00000376707 C2orf78A6NCI8 922 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 TRIM66O15016 1216 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 PHACTR2O75167 634 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 CLSTN1O94985 981 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 FAM163BP0C2L3 166 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 HDCP19113 662 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 CMA1P23946 247 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 IFNAR2P48551 515 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 PDE6CP51160 858 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 MYL6P60660 151 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 LMNB2Q03252 620 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 USP4Q13107 963 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 OSCP1Q8WVF1 389 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 ZNF516Q92618 1163 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 CHFRQ96EP1 664 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 EXOC1Q9NV70 894 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 DLL3Q9NYJ7 618 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 TRPM5Q9NZQ8 1165 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 GCNT4Q9P109 453 aa22.45■■□□□ 1.18
VSX1-201ENST00000376707 NXF1Q9UBU9 619 aaKnown RBP22.45■■□□□ 1.18
VSX1-201ENST00000376707 KIF26AQ9ULI4 1882 aaPredicted RBP22.45■■□□□ 1.18
VSX1-201ENST00000376707 DCHS1Q96JQ0 3298 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 HRO43593 1189 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 ATG13O75143 517 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 STAU1O95793 577 aaKnown RBP22.44■■□□□ 1.18
VSX1-201ENST00000376707 HOXA6P31267 233 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 ATICP31939 592 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 KRT85P78386 507 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 SRSF5Q13243 272 aaKnown RBP22.44■■□□□ 1.18
VSX1-201ENST00000376707 SH3RF2Q8TEC5 729 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms