RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CBWD2Q8IUF1 395 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 XXYLT1Q8NBI6 393 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 CGRRF1Q99675 332 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 HPS4Q9NQG7 708 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 AGPAT3Q9NRZ7 376 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 TRPM5Q9NZQ8 1165 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 CFAP45Q9UL16 551 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 ARHGAP26Q9UNA1 814 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 CCL26Q9Y258 94 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 ATP8B3O60423 1300 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 PVALEFA0A1B0GWK0 134 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 HRO43593 1189 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 TACC1O75410 805 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 DLATP10515 647 aaKnown RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 HDCP19113 662 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ATICP31939 592 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 GPR15P49685 360 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 AP3M2P53677 418 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ATXN1P54253 815 aaKnown RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 USP4Q13107 963 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 TRPC3Q13507 836 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 PSMD6Q15008 389 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ZNF77Q15935 545 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 LPAL2Q16609 132 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 HEATR6Q6AI08 1181 aaKnown RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 EPM2AIP1Q7L775 607 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 TRAPPC11Q7Z392 1133 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 C11orf74Q86VG3 221 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ZSWIM2Q8NEG5 633 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 OR5B17Q8NGF7 314 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 GAB3Q8WWW8 586 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 SNX21Q969T3 373 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 MYLPFQ96A32 169 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 SYAP1Q96A49 352 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-204ENST00000376643 FGFBP2Q9BYJ0 223 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 BACH2Q9BYV9 841 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ELOVL4Q9GZR5 314 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 ECT2Q9H8V3 914 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 SEMA4GQ9NTN9 838 aa15.76■□□□□ 0.11
HDAC6-204ENST00000376643 RPP40O75818 363 aaKnown RBP15.75■□□□□ 0.11
HDAC6-204ENST00000376643 STAU1O95793 577 aaKnown RBP15.75■□□□□ 0.11
HDAC6-204ENST00000376643 CCDC192P0DO97 292 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 TGM1P22735 817 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 GNL1P36915 607 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-204ENST00000376643 NOP14P78316 857 aaKnown RBP15.75■□□□□ 0.11
HDAC6-204ENST00000376643 SDHAF4Q5VUM1 108 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 TRIM68Q6AZZ1 485 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 FSTL4Q6MZW2 842 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 PRR23CQ6ZRP0 262 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 OSTM1Q86WC4 334 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 C12orf56Q8IXR9 622 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 MYCBPAPQ8TBZ2 947 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 CD101Q93033 1021 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 SLITRK1Q96PX8 696 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 PCDHGA5Q9Y5G8 931 aa15.75■□□□□ 0.11
HDAC6-204ENST00000376643 KIF26AQ9ULI4 1882 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 MED19A0JLT2 244 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 SLC30A4O14863 429 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 PHACTR2O75167 634 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 TADA3O75528 432 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 BDNFP23560 247 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 GJA4P35212 333 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 CDR1P51861 262 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 PSMC1P62191 440 aaKnown RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 TDRD10Q5VZ19 366 aaKnown RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 LMBRD2Q68DH5 695 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 C12orf50Q8NA57 414 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-204ENST00000376643 PDZD8Q8NEN9 1154 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 OR6B3Q8NGW1 331 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 KBTBD7Q8WVZ9 684 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 TTLL2Q9BWV7 592 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 PARD6AQ9NPB6 346 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 DCHS1Q96JQ0 3298 aa15.74■□□□□ 0.11
HDAC6-204ENST00000376643 POLR2DO15514 142 aaKnown RBP15.73■□□□□ 0.11
HDAC6-204ENST00000376643 EXOC3O60645 756 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 RNF40O75150 1001 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 CLSTN1O94985 981 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 APBB3O95704 486 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 P4HA1P13674 534 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 ARSAP15289 507 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 ME1P48163 572 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 CYP2J2P51589 502 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 DMWDQ09019 674 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 ELF2Q15723 593 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 WDR72Q3MJ13 1102 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 PREPLQ4J6C6 727 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-204ENST00000376643 WDR44Q5JSH3 913 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 SHC4Q6S5L8 630 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 SYT13Q7L8C5 426 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms