RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 BTNL10A8MVZ5 291 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SSTR1P30872 391 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 GNL1P36915 607 aaPredicted RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 EFNA5P52803 228 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 PRAMEP78395 509 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 LLGL2Q6P1M3 1020 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 FRA10AC1Q70Z53 315 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
SMC1A-202ENST00000375340 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 TTYH3Q9C0H2 523 aa6.82□□□□□ -1.32
SMC1A-202ENST00000375340 E9PBE3 544 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MEIS2O14770 477 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KLHL41O60662 606 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZBTB7AO95365 584 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SNRPFP62306 86 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RPL10AP62906 217 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 TWF2Q6IBS0 349 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZCCHC23Q6ZST2 131 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 TFB1MQ8WVM0 346 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 IFT43Q96FT9 208 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 OXNAD1Q96HP4 312 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 NAF1Q96HR8 494 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 HES6Q96HZ4 224 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 CCDC138Q96M89 665 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MYOZ2Q9NPC6 264 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 DNAJC16Q9Y2G8 782 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 NUP98P52948 1817 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 C16orf89Q6UX73 402 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 APTXQ7Z2E3 356 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SLC7A14Q8TBB6 771 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RNF139Q8WU17 664 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PDCD6IPQ8WUM4 868 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 HPDLQ96IR7 371 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZBTB45Q96K62 511 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RSAD1Q9HA92 442 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PAK5Q9P286 719 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 LRP6O75581 1613 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 COPAP53621 1224 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 TTLL4Q14679 1199 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 GLRA4Q5JXX5 417 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 C1orf186Q6ZWK4 172 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 LRRC6Q86X45 466 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 AFG1LQ8WV93 481 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 USP13Q92995 863 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 BATF3Q9NR55 127 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SLC39A10Q9ULF5 831 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 VCAM1P19320 739 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 GLRBP48167 497 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KPNB1Q14974 876 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 UGCGQ16739 394 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF75CPQ92670 426 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 TAGLN3Q9UI15 199 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MID2Q9UJV3 735 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PTPN4P29074 926 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RFC5P40937 340 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 CCNA1P78396 465 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PREPLQ4J6C6 727 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MFSD7Q6UXD7 560 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SCN4BQ8IWT1 228 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 APPL2Q8NEU8 664 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 EXD1Q8NHP7 514 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MYO5AQ9Y4I1 1855 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PRPF31Q8WWY3 499 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 AP5M1Q9H0R1 490 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ANKEF1Q9NU02 776 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 DPP3Q9NY33 737 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SLC5A4Q9NY91 659 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF711Q9Y462 761 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KIAA0391O15091 583 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 AKAP10O43572 662 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PDE5AO76074 875 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KRT16P08779 473 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 TXNP10599 105 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 RBP3P10745 1247 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MED21Q13503 144 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 GRAMD4Q6IC98 578 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SAMD7Q7Z3H4 446 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 EFCAB3Q8N7B9 438 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KLK14Q9P0G3 267 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MYH1P12882 1939 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 MYH4Q9Y623 1939 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SETSIPP0DME0 302 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 HSPA8P11142 646 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 GZMAP12544 262 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 KCNA4P22459 653 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ADRA1DP25100 572 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 EN1Q05925 392 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 USP10Q14694 798 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 NPY5RQ15761 445 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 CCNG2Q16589 344 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 BTNL9Q6UXG8 535 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF280CQ8ND82 737 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 NMD3Q96D46 503 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms