RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CREG2Q8IUH2 290 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 UNC45BQ8IWX7 931 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 HIST1H2AHQ96KK5 128 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 HIST1H2AJQ99878 128 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 H2AFJQ9BTM1 129 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF302Q9NR11 478 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ARHGEF38Q9NXL2 777 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 NYAP2Q9P242 653 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 DBR1Q9UK59 544 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 CNTNAP5Q8WYK1 1306 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 KCNQ3O43525 872 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 FDPSP14324 419 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 VCPP55072 806 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 FAM45BPQ6NSW5 357 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 TIGD7Q6NT04 549 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 RDH11Q8TC12 318 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 MLXIPLQ9NP71 852 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SSU72Q9NP77 194 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PDZK1P1A8MUH7 402 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 UBTFL6P0CB48 400 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 KCNA2P16389 499 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PLEKHA7Q6IQ23 1121 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 LENG1Q96BZ8 264 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 GPAMQ9HCL2 828 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 NFIBO00712 420 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CNOT3O75175 753 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 ANGPT1Q15389 498 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 ABI1Q8IZP0 508 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CABLES1Q8TDN4 633 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SLC25A23Q9BV35 468 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 HAO1Q9UJM8 370 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 TECPR2O15040 1411 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 HEATR9A2RTY3 570 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 H3BQF6 201 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SNX3O60493 162 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 GINS2Q9Y248 185 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CYP2D7A0A087X1C5 515 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 C4orf33Q8N1A6 199 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SLC30A5Q8TAD4 765 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 VAT1Q99536 393 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 MAGEE1Q9HCI5 957 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 USE1Q9NZ43 259 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 AFF2P51816 1311 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 TPI1P60174 286 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 ZCCHC9Q8N567 271 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 LRRC40Q9H9A6 602 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CASZ1Q86V15 1759 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 RMDN3Q96TC7 470 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 MOV10Q9HCE1 1003 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 STK39Q9UEW8 545 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 KLHL3Q9UH77 587 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SLC22A2O15244 555 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CSF1RP07333 972 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF12P17014 697 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SERPINB5P36952 375 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 MMP13P45452 471 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 NCKAP1LP55160 1127 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 POU5F1BQ06416 359 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 TMC5Q6UXY8 1006 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 C16orf86Q6ZW13 317 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 DCLK2Q8N568 766 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 GORASP1Q9BQQ3 440 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 MATN2O00339 956 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 KIF2BQ8N4N8 673 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 FAM213AQ9BRX8 229 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 PCMTD2Q9NV79 361 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 SPEF2Q9C093 1822 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 PSMG1O95456 288 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 DLGAP3O95886 979 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 ADSLP30566 484 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 GSTT1P30711 240 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 TTC30AQ86WT1 665 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 RTKN2Q8IZC4 609 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CKAP2Q8WWK9 683 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 WNK4Q96J92 1243 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 IMPAD1Q9NX62 359 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CAND2O75155 1236 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
PTCH1-204ENST00000375290 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 PAFAH2Q99487 392 aa10.56□□□□□ -0.72
PTCH1-204ENST00000375290 PNPLA3Q9NST1 481 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms