RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DNAJC19Q96DA6 116 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 PRMT6Q96LA8 375 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 NDUFA13Q9P0J0 144 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 WNT7AO00755 349 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CASP5P51878 434 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 GOLGA7BQ2TAP0 167 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 TRMT5Q32P41 509 aaKnown RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 EFCAB12Q6NXP0 572 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 LAYNQ6UX15 382 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 ATPAF2Q8N5M1 289 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 GMCL1P1Q8NEA9 526 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 TFB1MQ8WVM0 346 aaKnown RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SNX19Q92543 992 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CHST7Q9NS84 486 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SSTR1P30872 391 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 FDFT1P37268 417 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 ELF3P78545 371 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 GCNT1Q02742 428 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 GPR162Q16538 588 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 WASHC2DQ5SRD0 308 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SNX30Q5VWJ9 437 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 OLFML2BQ68BL8 750 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 ZKSCAN4Q969J2 545 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CAAP1Q9H8G2 361 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 DNAJC16Q9Y2G8 782 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 F8W8V4 182 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 XPO1O14980 1071 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SRP72O76094 671 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 LSM8O95777 96 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 MAPTP10636 758 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PCYT1AP49585 367 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 STX5Q13190 355 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 ORC1Q13415 861 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 NAPEPLDQ6IQ20 393 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 NOP9Q86U38 636 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PARD3BQ8TEW8 1205 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 ZNF606Q8WXB4 792 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SGF29Q96ES7 293 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 TAGLN3Q9UI15 199 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 EML1O00423 815 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 HBP1O60381 514 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 TLR2O60603 784 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CYP2C8P10632 490 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 TGM2P21980 687 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CAP2P40123 477 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 VPS72Q15906 364 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CNPY3Q9BT09 278 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 OLA1Q9NTK5 396 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 DCDC2Q9UHG0 476 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SDR42E2A6NKP2 422 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 NFIBO00712 420 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 FKBP6O75344 327 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 APOA4P06727 396 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 THRAP10827 490 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 EPHB2P29323 1055 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PDK2Q15119 407 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PKN2Q16513 984 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 MFSD7Q6UXD7 560 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 IPMKQ8NFU5 416 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SLC7A14Q8TBB6 771 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 GANQ9H2C0 597 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PAPOLBQ9NRJ5 636 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 USP18Q9UMW8 372 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 LRCH1Q9Y2L9 728 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 RICTORQ6R327 1708 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CBX6O95503 412 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 SHBGP04278 402 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 IL1R1P14778 569 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 BMPR2Q13873 1038 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 TMPRSS6Q8IU80 811 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 CALML6Q8TD86 181 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 PABPC5Q96DU9 382 aaKnown RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 VCPIP1Q96JH7 1222 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 RUBCNLQ9H714 662 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 AVENQ9NQS1 362 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-203ENST00000375274 TBC1D23Q9NUY8 699 aa11.98□□□□□ -0.49
PTCH1-203ENST00000375274 GAS2O43903 313 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 CD4P01730 458 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 DRG2P55039 364 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 MYL6P60660 151 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 CACNB2Q08289 660 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 AUHQ13825 339 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 EPS8L1Q8TE68 723 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms