RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TRIM66O15016 1216 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CCL16O15467 120 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 AP1G2O75843 785 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 KRT5P13647 590 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CCDC130P13994 396 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CD19P15391 556 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 PTPN2P17706 415 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CLCN1P35523 988 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 GRIK1P39086 918 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 USP8P40818 1118 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 MTHFRP42898 656 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CDR1P51861 262 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
HSPG2-202ENST00000374676 RAPGEF1Q13905 1077 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 MEA1Q16626 185 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 AAK1Q2M2I8 961 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 LCLAT1Q6UWP7 414 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 ITIH5Q86UX2 942 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 ELMOD1Q8N336 334 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 ANKRD52Q8NB46 1076 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-202ENST00000374676 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 PSMG2Q969U7 264 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 IQCDQ96DY2 449 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 RIPOR3Q96MK2 946 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 NECTIN4Q96NY8 510 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 NUP58Q9BVL2 599 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 UBXN6Q9BZV1 441 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 CSNK1G1Q9HCP0 422 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-202ENST00000374676 THEGQ9P2T0 379 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
HSPG2-202ENST00000374676 DENND4CQ5VZ89 1909 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 F8VP50 259 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 F8VZ95 297 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 O00370 1275 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 CYP26A1O43174 497 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 MBTPS2O43462 519 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 SOAT2O75908 522 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 FAM200BP0CF97 657 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 CSH1P0DML2 217 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 CSH2P0DML3 217 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ATF6P18850 670 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ANXA13P27216 316 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ADORA2BP29275 332 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 STAT1P42224 750 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 EPHA5P54756 1037 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 PTK2Q05397 1052 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 VEPH1Q14D04 833 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 CLUL1Q15846 466 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 DDR2Q16832 855 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 CACNA2D4Q7Z3S7 1137 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 DNAJB7Q7Z6W7 309 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-202ENST00000374676 SCN4BQ8IWT1 228 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 SMOQ99835 787 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ZSWIM1Q9BR11 485 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 TTYH3Q9C0H2 523 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 PIDD1Q9HB75 910 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 WDR6Q9NNW5 1121 aaKnown RBP12.04□□□□□ -0.48
HSPG2-202ENST00000374676 PNPLA8Q9NP80 782 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-202ENST00000374676 TMEM30AQ9NV96 361 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 DNMT3BQ9UBC3 853 aaKnown RBP12.04□□□□□ -0.48
HSPG2-202ENST00000374676 HESX1Q9UBX0 185 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 ITIH6Q6UXX5 1313 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
HSPG2-202ENST00000374676 AP5Z1O43299 807 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 MED7O43513 233 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 HMGA1P17096 107 aaKnown RBP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 NPR3P17342 541 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 GNA15P30679 374 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 SOX5P35711 763 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 GPR15P49685 360 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 CACNA2D1P54289 1103 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 TFF2Q03403 129 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 CLEC20AQ6ZU45 233 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 FMNL3Q8IVF7 1028 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 FEZF2Q8TBJ5 459 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 GIPC2Q8TF65 315 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 ATXN2LQ8WWM7 1075 aaKnown RBP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 BAP1Q92560 729 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 TRMT2BQ96GJ1 504 aaKnown RBP12.03□□□□□ -0.48
HSPG2-202ENST00000374676 MYRFLQ96LU7 910 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 KCNK16Q96T55 309 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 LRRC3Q9BY71 257 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
HSPG2-202ENST00000374676 KRT82Q9NSB4 513 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms