RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TGFB3P10600 412 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CA4P22748 312 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 ABCG1P45844 678 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 E2F5Q15329 346 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CES3Q6UWW8 571 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 WDR49Q8IV35 697 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 C12orf56Q8IXR9 622 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 PYROXD1Q8WU10 500 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 RAB6BQ9NRW1 208 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 G3BP2Q9UN86 482 aaKnown RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 ZBTB42B2RXF5 422 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 SKAP2O75563 359 aaPredicted RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 RECQL4O94761 1208 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 POMCP01189 267 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 MBTD1Q05BQ5 628 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 ITIH3Q06033 890 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 RBBP5Q15291 538 aaKnown RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 ENOSF1Q7L5Y1 443 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 UNC45BQ8IWX7 931 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CACNA2D3Q8IZS8 1091 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 TMEM176AQ96HP8 235 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 APOL2Q9BQE5 337 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 SAMD15Q9P1V8 674 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
CXCL12-203ENST00000374429 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
CXCL12-203ENST00000374429 CXCL11O14625 94 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 TNPO2O14787 897 aaKnown RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 MAGEA4P43358 317 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 GTF2A2P52657 109 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 DNAJC3Q13217 504 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 ANKRD22Q5VYY1 191 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 TBC1D1Q86TI0 1168 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 PYROXD2Q8N2H3 581 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 DEPDC1BQ8WUY9 529 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 EDEM1Q92611 657 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 NKIRAS1Q9NYS0 192 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 UBP1Q9NZI7 540 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 TCRBV7S3A2A0A539 114 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 SCAMP3O14828 347 aaKnown RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 KITP10721 976 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 MMP8P22894 467 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 GBP2P32456 591 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 CTCFP49711 727 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 GKAP1Q5VSY0 366 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 FAM210AQ96ND0 272 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 SH3GL3Q99963 347 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 CCDC77Q9BR77 488 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 UNKQ9C0B0 810 aaKnown RBP11.33□□□□□ -0.6
CXCL12-203ENST00000374429 EPN3Q9H201 632 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 SNX25Q9H3E2 840 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 ST6GALNAC4Q9H4F1 302 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 C5orf42Q9H799 3197 aa11.33□□□□□ -0.6
CXCL12-203ENST00000374429 FAM187AA6NFU0 413 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 USP12O75317 370 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 CALB1P05937 261 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 CENPCQ03188 943 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ZNF449Q6P9G9 518 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 C3orf62Q6ZUJ4 267 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 KIRREL3Q8IZU9 778 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 KCTD17Q8N5Z5 321 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 FGD4Q96M96 766 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 RHOBTB2Q9BYZ6 727 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ZDHHC18Q9NUE0 388 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 USP18Q9UMW8 372 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 GRIN2DO15399 1336 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 A0A1B0GUA9 196 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 SNAI1O95863 264 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ASPAP45381 313 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 RAD23BP54727 409 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 SESN2P58004 480 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 TARBP2Q15633 366 aaKnown RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 NFIL3Q16649 462 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 DGKDQ16760 1214 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 MTHFD1LQ6UB35 978 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ILDR2Q71H61 639 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 PPM1NQ8N819 430 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 SLC2A14Q8TDB8 520 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms