RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 WSCD1Q658N2 575 aa16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 SFTPA1Q8IWL2 248 aa16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 ARL14EPQ8N8R7 260 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 TRMT2BQ96GJ1 504 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 TMLHEQ9NVH6 421 aa16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 APOBEC2Q9Y235 224 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 SETXQ7Z333 2677 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-203ENST00000373163 ANO9A1A5B4 782 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 MYMKA6NI61 221 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 FAM189A1O60320 539 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 CHRM1P11229 460 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 TCF3P15923 654 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 KCNB1Q14721 858 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 TMEM132DQ14C87 1099 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 DDR2Q16832 855 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 NAXDQ8IW45 347 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 MYRFLQ96LU7 910 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 GCNT4Q9P109 453 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 ARHGAP26Q9UNA1 814 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 STK24Q9Y6E0 443 aa16.9■□□□□ 0.3
TRAPPC3-203ENST00000373163 TSC2P49815 1807 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 C2orf78A6NCI8 922 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 OGTO15294 1046 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 ADAM23O75077 832 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 TAF6P49848 677 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 LIG4P49917 911 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 RPL10AP62906 217 aaKnown RBP16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 TSPY1Q01534 308 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 ZNF33AQ06730 810 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 NFE2Q16621 373 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 EMC10Q5UCC4 262 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 SLC36A4Q6YBV0 504 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 CD302Q8IX05 232 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 FSIP1Q8NA03 581 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 SPATA18Q8TC71 538 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 PNKPQ96T60 521 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 DKK4Q9UBT3 224 aa16.89■□□□□ 0.29
TRAPPC3-203ENST00000373163 CACNA1EQ15878 2313 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 MYO16Q9Y6X6 1858 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 GJB3O75712 270 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 KAT7O95251 611 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 PRB1P04280 392 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 APODP05090 189 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 CYP17A1P05093 508 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 HDCP19113 662 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 KIR2DL1P43626 348 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 SLC6A11P48066 632 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 MESP2Q0VG99 397 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 NSUN7Q8NE18 718 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 LRRC15Q8TF66 581 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 LEO1Q8WVC0 666 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 ABCB6Q9NP58 842 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 ZDHHC4Q9NPG8 344 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 DERAQ9Y315 318 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 TNRC6BQ9UPQ9 1833 aaKnown RBP16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 PCNX2A6NKB5 2137 aa16.88■□□□□ 0.29
TRAPPC3-203ENST00000373163 A0A1W2PQD8 194 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 H0YCG3 227 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 HNRNPDLO14979 420 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 CYP2F1P24903 491 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 PDIA5Q14554 519 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 TTC38Q5R3I4 469 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 KCNK18Q7Z418 384 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 SLCO6A1Q86UG4 719 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 IGSF22Q8N9C0 903 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 GTF3C6Q969F1 213 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 CRELD1Q96HD1 420 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 UBL7Q96S82 380 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 RAB34Q9BZG1 259 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 CCSER1Q9C0I3 900 aa16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
TRAPPC3-203ENST00000373163 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 PP2D1A8MPX8 630 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 LEFTY2O00292 366 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 JAK2O60674 1132 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 CDC25AP30304 524 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 EIF2DP41214 584 aaKnown RBP16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 PDE6CP51160 858 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 ZXDBP98169 803 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 GUCY1B3Q02153 619 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 RESTQ13127 1097 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 DHCR24Q15392 516 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 PLEKHG6Q3KR16 790 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 GLRX5Q86SX6 157 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 SLC41A1Q8IVJ1 513 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 C4orf32Q8N8J7 132 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 HSPA12BQ96MM6 686 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 MSTO1Q9BUK6 570 aa16.86■□□□□ 0.29
TRAPPC3-203ENST00000373163 ARHGEF4Q9NR80 690 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms