RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SLFN13Q68D06 897 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 IL31Q6EBC2 164 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF671Q8TAW3 534 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TRMT13Q9NUP7 481 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SMARCAL1Q9NZC9 954 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SMCO3A2RU48 225 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TSPAN19P0C672 248 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 PTPN7P35236 360 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 ELMOD1Q8N336 334 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF333Q96JL9 665 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC25A13Q9UJS0 675 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 RAG1P15918 1043 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC1A1P43005 524 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 NPATQ14207 1427 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SH3BP4Q9P0V3 963 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 ATP10DQ9P241 1426 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 FARP1Q9Y4F1 1045 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 MROH7Q68CQ1 1323 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 A0A0B4J269 797 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 UBE2QL1A1L167 161 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 PIK3CDO00329 1044 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 BST2Q10589 180 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TUBB3Q13509 450 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC9A6Q92581 669 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TRIM3O75382 744 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 LDHAP00338 332 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 MAGEA4P43358 317 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 MINDY2Q8NBR6 621 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 PHACTR1Q9C0D0 580 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 ISLR2Q6UXK2 745 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 LRRC17Q8N6Y2 441 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 POC5Q8NA72 575 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 NACC2Q96BF6 587 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TMEM237Q96Q45 408 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TRIM10Q9UDY6 481 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 C3orf70A6NLC5 250 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 NPR3P17342 541 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 SPRP35270 261 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 VAC14Q08AM6 782 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TBCELQ5QJ74 424 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 E4F1Q66K89 784 aaPredicted RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 CASP12Q6UXS9 341 aa15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 EIF3MQ7L2H7 374 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 EPS8L3Q8TE67 593 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 CELF4Q9BZC1 486 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 DDX20Q9UHI6 824 aaKnown RBP15.85■□□□□ 0.13
GTF3C4-201ENST00000372146 TNRQ92752 1358 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 RALGDSQ12967 914 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 CDC16Q13042 620 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 SEL1L3Q68CR1 1132 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TPD52L3Q96J77 140 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 PRDM5Q9NQX1 630 aaPredicted RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 METTL5Q9NRN9 209 aaKnown RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 FASP25445 335 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 RAB2AP61019 212 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 CLEC16AQ2KHT3 1053 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 OTUD5Q96G74 571 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 SERPINB12Q96P63 405 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 PSIP1O75475 530 aaKnown RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 UBOX5O94941 541 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 S100A2P29034 98 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TUBA3CQ13748 450 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 KCNB2Q92953 911 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 SEPHS2Q99611 448 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TMEM120AQ9BXJ8 343 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 GPC3P51654 580 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 ITGA8P53708 1063 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 SLC34A1Q06495 639 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 ATPAF2Q8N5M1 289 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 FOSL1P15407 271 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 NPR2P20594 1047 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 BCAMP50895 628 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 RPS6KA3P51812 740 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 DDB1Q16531 1140 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 A0A0X1KG70 313 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 RFX3P48380 749 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 ZNF589Q86UQ0 364 aaPredicted RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 O00370 1275 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 HS6ST1O60243 411 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 DARSP14868 501 aaKnown RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TUBA4AP68366 448 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 COASYQ13057 564 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 GSTA3Q16772 222 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 SPATA18Q8TC71 538 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 FNIP1Q8TF40 1166 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 ZC3H10Q96K80 434 aaKnown RBP15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 DSN1Q9H410 356 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 TMEM51Q9NW97 253 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 CYP39A1Q9NYL5 469 aa15.84■□□□□ 0.13
GTF3C4-201ENST00000372146 EIF2AK2P19525 551 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms